RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CD300AQ9UGN4 299 aa22.14■■□□□ 1.13
CCDC47-204ENST00000582252 EIF3LQ9Y262 564 aaKnown RBP22.14■■□□□ 1.13
CCDC47-204ENST00000582252 C1QTNF3-AMACRE9PGA6 284 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 H3BNX3 289 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 CASQ2O14958 399 aaPredicted RBP22.13■■□□□ 1.13
CCDC47-204ENST00000582252 EEDO75530 441 aaKnown RBP22.13■■□□□ 1.13
CCDC47-204ENST00000582252 SLCO2B1O94956 709 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 NPPAP01160 153 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 GSTM1P09488 218 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 TCN1P20061 433 aaPredicted RBP22.13■■□□□ 1.13
CCDC47-204ENST00000582252 MAP4P27816 1152 aaKnown RBP22.13■■□□□ 1.13
CCDC47-204ENST00000582252 PRLHRP49683 370 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 SLC7A2P52569 658 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 GSTM4Q03013 218 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 PRKG2Q13237 762 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 ZNF234Q14588 700 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 ABRAXAS2Q15018 415 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 IMPG1Q17R60 797 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 AP5B1Q2VPB7 878 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 GGTA1PQ4G0N0 100 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 HABP4Q5JVS0 413 aaKnown RBP22.13■■□□□ 1.13
CCDC47-204ENST00000582252 SPATA24Q86W54 205 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 PQLC1Q8N2U9 271 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 GLMNQ92990 594 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 TMEM159Q96B96 161 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 CCM2Q9BSQ5 444 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 EPHX3Q9H6B9 360 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 ACTR8Q9H981 624 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 MAP10Q9P2G4 905 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 ABCD2Q9UBJ2 740 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 KLQ9UEF7 1012 aa22.13■■□□□ 1.13
CCDC47-204ENST00000582252 SGTAO43765 313 aa22.12■■□□□ 1.13
CCDC47-204ENST00000582252 PCSK2P16519 638 aa22.12■■□□□ 1.13
CCDC47-204ENST00000582252 UFM1P61960 85 aa22.12■■□□□ 1.13
CCDC47-204ENST00000582252 MRPS22P82650 360 aaKnown RBP22.12■■□□□ 1.13
CCDC47-204ENST00000582252 TMEM115Q12893 351 aaPredicted RBP22.12■■□□□ 1.13
CCDC47-204ENST00000582252 MBOAT1Q6ZNC8 495 aa22.12■■□□□ 1.13
CCDC47-204ENST00000582252 TRIM46Q7Z4K8 759 aa22.12■■□□□ 1.13
CCDC47-204ENST00000582252 WRAP53Q9BUR4 548 aaKnown RBP22.12■■□□□ 1.13
CCDC47-204ENST00000582252 TRIM15Q9C019 465 aa22.12■■□□□ 1.13
CCDC47-204ENST00000582252 KLHL4Q9C0H6 718 aa22.12■■□□□ 1.13
CCDC47-204ENST00000582252 BATF3Q9NR55 127 aa22.12■■□□□ 1.13
CCDC47-204ENST00000582252 OR2AG2A6NM03 316 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 LOC730098B7Z3J9 87 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 HLA-EP13747 358 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 OPRD1P41143 372 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 NFYCQ13952 458 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 SMAD2Q15796 467 aaKnown RBP22.11■■□□□ 1.13
CCDC47-204ENST00000582252 LEXMQ3ZCV2 418 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 IZUMO2Q6UXV1 221 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 PRR23BQ6ZRT6 265 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 VRK3Q8IV63 474 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 CSGALNACT1Q8TDX6 532 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 ATL1Q8WXF7 558 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 ARRDC3Q96B67 414 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 LRRC58Q96CX6 371 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 NUS1Q96E22 293 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 LRGUKQ96M69 825 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 ZBTB18Q99592 522 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 ECSITQ9BQ95 431 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 TMEM245Q9H330 911 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 SLC52A3Q9NQ40 469 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 ZNF490Q9ULM2 529 aaPredicted RBP22.11■■□□□ 1.13
CCDC47-204ENST00000582252 SNX6Q9UNH7 406 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 RNF11Q9Y3C5 154 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 C15orf38-AP3S2A0A0A6YYH1 394 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 TBC1D3BA6NDS4 549 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 PRORSD1PA6NEY8 169 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 MANBAO00462 879 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 ADRB3P13945 408 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 SLC6A12P48065 614 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 CCR3P51677 355 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 BNIP2Q12982 314 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 AAK1Q2M2I8 961 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 NUDT18Q6ZVK8 323 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 ARPINQ7Z6K5 226 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 ZFAND4Q86XD8 727 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 CATSPER1Q8NEC5 780 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 USP7Q93009 1102 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 FBXL8Q96CD0 374 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 FOPNLQ96NB1 174 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 DNAJC11Q9NVH1 559 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 MBD1Q9UIS9 605 aaPredicted RBP22.11■■□□□ 1.13
CCDC47-204ENST00000582252 ITM2BQ9Y287 266 aa22.11■■□□□ 1.13
CCDC47-204ENST00000582252 PEX1O43933 1283 aa22.1■■□□□ 1.13
CCDC47-204ENST00000582252 CATP04040 527 aaKnown RBP22.1■■□□□ 1.13
CCDC47-204ENST00000582252 C8BP07358 591 aa22.1■■□□□ 1.13
CCDC47-204ENST00000582252 MSX2P35548 267 aaPredicted RBP22.1■■□□□ 1.13
CCDC47-204ENST00000582252 GNPDA1P46926 289 aa22.1■■□□□ 1.13
CCDC47-204ENST00000582252 TRIP10Q15642 601 aa22.1■■□□□ 1.13
CCDC47-204ENST00000582252 CACHD1Q5VU97 1274 aa22.1■■□□□ 1.13
CCDC47-204ENST00000582252 IL23RQ5VWK5 629 aa22.1■■□□□ 1.13
CCDC47-204ENST00000582252 CYP20A1Q6UW02 462 aa22.1■■□□□ 1.13
CCDC47-204ENST00000582252 RASGRP3Q8IV61 690 aa22.1■■□□□ 1.13
CCDC47-204ENST00000582252 RASGEF1AQ8N9B8 481 aa22.1■■□□□ 1.13
CCDC47-204ENST00000582252 RAB7BQ96AH8 199 aa22.1■■□□□ 1.13
CCDC47-204ENST00000582252 MUC13Q9H3R2 512 aa22.1■■□□□ 1.13
CCDC47-204ENST00000582252 ASIC5Q9NY37 505 aa22.1■■□□□ 1.13
CCDC47-204ENST00000582252 POLR3HQ9Y535 204 aaPredicted RBP22.1■■□□□ 1.13
CCDC47-204ENST00000582252 COL4A2P08572 1712 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms