RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 POLG2Q9UHN1 485 aa20.27■□□□□ 0.84
CCDC42-203ENST00000581598 ZNF148Q9UQR1 794 aa20.27■□□□□ 0.84
CCDC42-203ENST00000581598 FARSAQ9Y285 508 aaKnown RBP20.27■□□□□ 0.84
CCDC42-203ENST00000581598 MAN2B2Q9Y2E5 1009 aa20.27■□□□□ 0.84
CCDC42-203ENST00000581598 MAST4O15021 2626 aa20.27■□□□□ 0.84
CCDC42-203ENST00000581598 UBR5O95071 2799 aaPredicted RBP20.26■□□□□ 0.83
CCDC42-203ENST00000581598 GOLGA6L10A0A0M3HER8 536 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 OR51F1A6NGY5 319 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 F8W8V4 182 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 CCDC188H7C350 402 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 IFNB1P01574 187 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 RAB40ALP0C0E4 278 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 OR56A5P0C7T3 313 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 SHMT2P34897 504 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 RORAP35398 523 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 ABRQ12979 859 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 PPP1R21Q6ZMI0 780 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 NLRP9Q7RTR0 991 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 TBC1D21Q8IYX1 336 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 CEP112Q8N8E3 955 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 MNS1Q8NEH6 495 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 SPATA4Q8NEY3 305 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 OR1L3Q8NH93 324 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 MR1Q95460 341 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 HDAC10Q969S8 669 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 RUFY1Q96T51 708 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 CHRNA10Q9GZZ6 450 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 ACTR10Q9NZ32 417 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 PAK5Q9P286 719 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 ICKQ9UPZ9 632 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 TP53TG5Q9Y2B4 290 aa20.26■□□□□ 0.83
CCDC42-203ENST00000581598 CCDC78A2IDD5 438 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 TMEM150CB9EJG8 249 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 MEN1O00255 615 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 PHF2O75151 1096 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 GOT2P00505 430 aaKnown RBP20.25■□□□□ 0.83
CCDC42-203ENST00000581598 LMAN1P49257 510 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 KLRB1Q12918 225 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 PRKG2Q13237 762 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 SPESP1Q6UW49 350 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 OR5AR1Q8NGP9 310 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 OR5K2Q8NHB8 316 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 C1orf54Q8WWF1 131 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 CHST8Q9H2A9 424 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 XKR8Q9H6D3 395 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 SERTAD3Q9UJW9 196 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 TLK1Q9UKI8 766 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 ASF1AQ9Y294 204 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 TCAF1Q9Y4C2 921 aa20.25■□□□□ 0.83
CCDC42-203ENST00000581598 BHMG1C9JSJ3 638 aaPredicted RBP20.24■□□□□ 0.83
CCDC42-203ENST00000581598 E7EVH7 732 aa20.24■□□□□ 0.83
CCDC42-203ENST00000581598 GRIA1P42261 906 aa20.24■□□□□ 0.83
CCDC42-203ENST00000581598 RPS18P62269 152 aaKnown RBP20.24■□□□□ 0.83
CCDC42-203ENST00000581598 ZNF534Q76KX8 674 aa20.24■□□□□ 0.83
CCDC42-203ENST00000581598 OR4L1Q8NH43 312 aa20.24■□□□□ 0.83
CCDC42-203ENST00000581598 CLIP3Q96DZ5 547 aa20.24■□□□□ 0.83
CCDC42-203ENST00000581598 NRTNQ99748 197 aa20.24■□□□□ 0.83
CCDC42-203ENST00000581598 CARD6Q9BX69 1037 aa20.24■□□□□ 0.83
CCDC42-203ENST00000581598 NLNQ9BYT8 704 aa20.24■□□□□ 0.83
CCDC42-203ENST00000581598 RAB6BQ9NRW1 208 aa20.24■□□□□ 0.83
CCDC42-203ENST00000581598 PCMTD2Q9NV79 361 aa20.24■□□□□ 0.83
CCDC42-203ENST00000581598 OR6C2Q9NZP2 312 aa20.24■□□□□ 0.83
CCDC42-203ENST00000581598 SLC2A6Q9UGQ3 507 aa20.24■□□□□ 0.83
CCDC42-203ENST00000581598 KDM1AO60341 852 aa20.23■□□□□ 0.83
CCDC42-203ENST00000581598 PPARGP37231 505 aaPredicted RBP20.23■□□□□ 0.83
CCDC42-203ENST00000581598 FNTAP49354 379 aa20.23■□□□□ 0.83
CCDC42-203ENST00000581598 ITGA1P56199 1179 aa20.23■□□□□ 0.83
CCDC42-203ENST00000581598 IL10RAQ13651 578 aa20.23■□□□□ 0.83
CCDC42-203ENST00000581598 SYTL3Q4VX76 610 aa20.23■□□□□ 0.83
CCDC42-203ENST00000581598 PRAMEF17Q5VTA0 474 aa20.23■□□□□ 0.83
CCDC42-203ENST00000581598 C4orf22Q6V702 233 aa20.23■□□□□ 0.83
CCDC42-203ENST00000581598 UNC5AQ6ZN44 842 aa20.23■□□□□ 0.83
CCDC42-203ENST00000581598 CCDC89Q8N998 374 aa20.23■□□□□ 0.83
CCDC42-203ENST00000581598 ADAMTS17Q8TE56 1095 aa20.23■□□□□ 0.83
CCDC42-203ENST00000581598 MAGOHBQ96A72 148 aaKnown RBP20.23■□□□□ 0.83
CCDC42-203ENST00000581598 ZNF778Q96MU6 729 aa20.23■□□□□ 0.83
CCDC42-203ENST00000581598 DPH2Q9BQC3 489 aaPredicted RBP20.23■□□□□ 0.83
CCDC42-203ENST00000581598 ACTR5Q9H9F9 607 aaPredicted RBP20.23■□□□□ 0.83
CCDC42-203ENST00000581598 EIF2B3Q9NR50 452 aaKnown RBP20.23■□□□□ 0.83
CCDC42-203ENST00000581598 HECTD1Q9ULT8 2610 aa20.23■□□□□ 0.83
CCDC42-203ENST00000581598 DRG1Q9Y295 367 aaKnown RBP20.23■□□□□ 0.83
CCDC42-203ENST00000581598 MED13Q9UHV7 2174 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 CTAGE15A4D2H0 777 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 OR1I1O60431 355 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 SNRNP200O75643 2136 aaKnown RBP20.22■□□□□ 0.83
CCDC42-203ENST00000581598 CAPN1P07384 714 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 CHRM5P08912 532 aaPredicted RBP20.22■□□□□ 0.83
CCDC42-203ENST00000581598 HBQ1P09105 142 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 CTAGE8P0CG41 777 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 TPBGLP0DKB5 382 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 ETS1P14921 441 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 PVRP15151 417 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 CYP2A7P20853 494 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 PRAMEP78395 509 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 FOXK1P85037 733 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 C2orf54Q08AI8 447 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 SNX1Q13596 522 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 FASTKD1Q53R41 847 aaKnown RBP20.22■□□□□ 0.83
CCDC42-203ENST00000581598 DNAJC21Q5F1R6 531 aaKnown RBP20.22■□□□□ 0.83
CCDC42-203ENST00000581598 TTC27Q6P3X3 843 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms