RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 BOP1Q14137 746 aaKnown RBP9.42□□□□□ -0.9
TOP3A-211ENST00000581536 ITIH4Q14624 930 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 TPSAB1Q15661 275 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 GPR19Q15760 415 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 TBR1Q16650 682 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 PRAMEF17Q5VTA0 474 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 LYPLAL1Q5VWZ2 237 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 PWWP2BQ6NUJ5 590 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 CCDC137Q6PK04 289 aaKnown RBP9.42□□□□□ -0.9
TOP3A-211ENST00000581536 AFTPHQ6ULP2 937 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 C4orf22Q6V702 233 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 PACS1Q6VY07 963 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 NLRP9Q7RTR0 991 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 RASGRP3Q8IV61 690 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 ADGRF3Q8IZF5 1079 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 NLGN4XQ8N0W4 816 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 AGGF1Q8N302 714 aaeCLIP9.42□□□□□ -0.9
TOP3A-211ENST00000581536 SIDT2Q8NBJ9 832 aaKnown RBP9.42□□□□□ -0.9
TOP3A-211ENST00000581536 NLGN4YQ8NFZ3 816 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-211ENST00000581536 OR52E1Q8NGJ3 308 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 LCN9Q8WX39 176 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 CPT1BQ92523 772 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 SLC41A2Q96JW4 573 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 HGH1Q9BTY7 390 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 KIFC1Q9BW19 673 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 SRMSQ9H3Y6 488 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 EIF2B3Q9NR50 452 aaKnown RBP9.42□□□□□ -0.9
TOP3A-211ENST00000581536 HOMER3Q9NSC5 361 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 CATSPERZQ9NTU4 200 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 IL1RAPL1Q9NZN1 696 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 BFARQ9NZS9 450 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 GALPQ9UBC7 116 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 CIDEBQ9UHD4 219 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 PYCARDQ9ULZ3 195 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 PLAGL1Q9UM63 463 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 CDYLQ9Y232 598 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 FER1L5A0AVI2 2057 aa9.42□□□□□ -0.9
TOP3A-211ENST00000581536 MED13Q9UHV7 2174 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-211ENST00000581536 GSAPA4D1B5 854 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 KLHL33A6NCF5 533 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 EIF4E1BA6NMX2 242 aaKnown RBP9.41□□□□□ -0.9
TOP3A-211ENST00000581536 IFRD1O00458 451 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-211ENST00000581536 LIN7AO14910 233 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-211ENST00000581536 TMEM63AO94886 807 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 VAPBO95292 243 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 PVRP15151 417 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 MAP4P27816 1152 aaKnown RBP9.41□□□□□ -0.9
TOP3A-211ENST00000581536 HSPA14Q0VDF9 509 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 RPA4Q13156 261 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 IL11RAQ14626 422 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 CYP1B1Q16678 543 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 ZNF789Q5FWF6 425 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 DNTTIP2Q5QJE6 756 aaKnown RBP9.41□□□□□ -0.9
TOP3A-211ENST00000581536 ATP1A1-AS1Q5TC04 95 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 ARMC6Q6NXE6 501 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 FAM199XQ6PEV8 388 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-211ENST00000581536 KLHL35Q6PF15 583 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 UNC5AQ6ZN44 842 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 AMIGO1Q86WK6 493 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 OOSP2Q86WS3 158 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 FAM20CQ8IXL6 584 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 ZNF843Q8N446 348 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 D2HGDHQ8N465 521 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 C2orf73Q8N5S3 287 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-211ENST00000581536 SLC38A9Q8NBW4 561 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 ACVR1CQ8NER5 493 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 CFAP61Q8NHU2 1237 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 ACTRT1Q8TDG2 376 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 UBXN4Q92575 508 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 SGSM3Q96HU1 749 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 TEFMQ96QE5 360 aaKnown RBP9.41□□□□□ -0.9
TOP3A-211ENST00000581536 RUFY1Q96T51 708 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 ZPBPQ9BS86 351 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 CARD6Q9BX69 1037 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 ULBP3Q9BZM4 244 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 IL22Q9GZX6 179 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 P2RY12Q9H244 342 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 TFB2MQ9H5Q4 396 aaKnown RBP9.41□□□□□ -0.9
TOP3A-211ENST00000581536 SPHK1Q9NYA1 384 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 ANAPC5Q9UJX4 755 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 SNX12Q9UMY4 172 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 SOX13Q9UN79 622 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 ICKQ9UPZ9 632 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 TDRKHQ9Y2W6 561 aaKnown RBP9.41□□□□□ -0.9
TOP3A-211ENST00000581536 HEBP2Q9Y5Z4 205 aa9.41□□□□□ -0.9
TOP3A-211ENST00000581536 TNRC6AQ8NDV7 1962 aaKnown RBP9.41□□□□□ -0.9
TOP3A-211ENST00000581536 HEATR5BQ9P2D3 2071 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 KRT87PA6NCN2 255 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 TLCD2A6NGC4 264 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 ZSCAN12O43309 604 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 HCRTR1O43613 425 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 GPC4O75487 556 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 FTH1P02794 183 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 CTSBP07858 339 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 FURINP09958 794 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 ST6GAL1P15907 406 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 CDH3P22223 829 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 AOAHP28039 575 aa9.4□□□□□ -0.9
TOP3A-211ENST00000581536 NDUFS1P28331 727 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms