RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 EDEM3Q9BZQ6 932 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 VN1R1Q9GZP7 353 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 B3GAT1Q9P2W7 334 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 CPSF3Q9UKF6 684 aaKnown RBP4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 ABT1Q9ULW3 272 aaKnown RBP4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 JRKLQ9Y4A0 524 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 NME7Q9Y5B8 376 aa4.39□□□□□ -1.71
SMCHD1-205ENST00000581383 A0A1B0GUV1 79 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 PRR32B1ATL7 298 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 ATP1A1P05023 1023 aaKnown RBP4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 ATP5BP06576 529 aaKnown RBP4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 RAB40ALP0C0E4 278 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 SMIM18P0DKX4 95 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 SCG2P13521 617 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 NR1D1P20393 614 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 MSH3P20585 1137 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 EPHA2P29317 976 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 NPY4RP50391 375 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 POLR2LP62875 67 aaKnown RBP4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 ROR1Q01973 937 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 ILF3Q12906 894 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 GAGE5Q13069 117 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 GAGE6Q13070 117 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 PPIGQ13427 754 aaKnown RBP eCLIP4.38□□□□□ -1.716e-11■■□□□ 11.9
SMCHD1-205ENST00000581383 FAM76BQ5HYJ3 339 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 MFSD12Q6NUT3 480 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 CORO6Q6QEF8 472 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 PPP1R21Q6ZMI0 780 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 C9orf139Q6ZV77 190 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 GALNTL5Q7Z4T8 443 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 ADCK2Q7Z695 626 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 DNAJB7Q7Z6W7 309 aaPredicted RBP4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 CFAP206Q8IYR0 622 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 METTL27Q8N6F8 245 aaPredicted RBP4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 PPFIBP2Q8ND30 876 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 DMBX1Q8NFW5 382 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 OR13J1Q8NGT2 312 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 SSMEM1Q8WWF3 244 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 SPSB1Q96BD6 273 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 STAMBPL1Q96FJ0 436 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 UPF2Q9HAU5 1272 aaKnown RBP4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 OLFML3Q9NRN5 406 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 SERINC1Q9NRX5 453 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 DONSONQ9NYP3 566 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 LIPGQ9Y5X9 500 aa4.38□□□□□ -1.71
SMCHD1-205ENST00000581383 A0A1W2PPQ1 181 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 A0A1W2PRB8 838 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 OR6C76A6NM76 312 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 GAPDHSO14556 408 aaPredicted RBP4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 PTGESO14684 152 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 ACSL3O95573 720 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 WDPCPO95876 746 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 IFNAR1P17181 557 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 AMD1P17707 334 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 EEF1B2P24534 225 aaKnown RBP4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 MAPK12P53778 367 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 POU5F1Q01860 360 aaKnown RBP4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 MZT1Q08AG7 82 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 ZNF273Q14593 569 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 FBXL22Q6P050 247 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 TRAT1Q6PIZ9 186 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 ANO5Q75V66 913 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 ZNF771Q7L3S4 317 aaPredicted RBP4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 ARHGAP22Q7Z5H3 698 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 ANKRD23Q86SG2 305 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 MAML2Q8IZL2 1156 aaPredicted RBP4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 CCAR2Q8N163 923 aaKnown RBP4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 TRIML1Q8N9V2 468 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 IQUBQ8NA54 791 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 SLC24A4Q8NFF2 622 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 FGFBP3Q8TAT2 258 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 ZNF473Q8WTR7 871 aaKnown RBP4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 OTUB1Q96FW1 271 aaPredicted RBP4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 FEVQ99581 238 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 CPNE1Q99829 537 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 ZNF556Q9HAH1 456 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 Q9N2K0 584 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 TAAR2Q9P1P5 351 aa4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 SOS1Q07889 1333 aaPredicted RBP4.37□□□□□ -1.71
SMCHD1-205ENST00000581383 SMCHD1A6NHR9 2005 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 ARHGEF37A1IGU5 675 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 NEMP2A6NFY4 417 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 E9PI62 339 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 CLDN4O14493 209 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 XPNPEP2O43895 674 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 IGHV2-70P01814 119 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 CRYAAP02489 173 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 JAK1P23458 1154 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 GP5P40197 560 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 ASCL1P50553 236 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 LIMK1P53667 647 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 CDH11P55287 796 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 CX3CL1P78423 397 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 ARL16Q0P5N6 197 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 ALDH1L2Q3SY69 923 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 SYT14P1Q58G82 188 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 WBP2NLQ6ICG8 309 aa4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 CAVIN1Q6NZI2 390 aaKnown RBP4.36□□□□□ -1.71
SMCHD1-205ENST00000581383 DCLRE1AQ6PJP8 1040 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms