RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 RDH14Q9HBH5 336 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 SLC40A1Q9NP59 571 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 SSU72Q9NP77 194 aaKnown RBP13.92□□□□□ -0.18
SKA2-205ENST00000580541 ZNF624Q9P2J8 865 aaPredicted RBP13.92□□□□□ -0.18
SKA2-205ENST00000580541 MID2Q9UJV3 735 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 RNF112Q9ULX5 631 aa13.92□□□□□ -0.18
SKA2-205ENST00000580541 VPS13AQ96RL7 3174 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 TRIM38O00635 465 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 NOBOXO60393 691 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 TFEBP19484 476 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 TAC1P20366 129 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 SDHBP21912 280 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 HNMTP50135 292 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 UBE2IP63279 158 aaKnown RBP13.91□□□□□ -0.18
SKA2-205ENST00000580541 ARHGAP19Q14CB8 494 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 TNFAIP8L3Q5GJ75 292 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 ISCA2Q86U28 154 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 TCAIMQ8N3R3 496 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 OR9A1PQ8NGU1 263 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 APOLD1Q96LR9 279 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 SLC32A1Q9H598 525 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 IGSF5Q9NSI5 407 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 MKS1Q9NXB0 559 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 SCHIP1Q9P0W5 487 aaPredicted RBP13.91□□□□□ -0.18
SKA2-205ENST00000580541 LRIT1Q9P2V4 623 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 FTSJ1Q9UET6 329 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 TSR3Q9UJK0 312 aaKnown RBP13.91□□□□□ -0.18
SKA2-205ENST00000580541 TDRKHQ9Y2W6 561 aaKnown RBP13.91□□□□□ -0.18
SKA2-205ENST00000580541 OARD1Q9Y530 152 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 CFAP20Q9Y6A4 193 aaKnown RBP13.91□□□□□ -0.18
SKA2-205ENST00000580541 RIF1Q5UIP0 2472 aaKnown RBP13.91□□□□□ -0.18
SKA2-205ENST00000580541 USP34Q70CQ2 3546 aa13.91□□□□□ -0.18
SKA2-205ENST00000580541 PTPRZ1P23471 2315 aaPredicted RBP13.9□□□□□ -0.18
SKA2-205ENST00000580541 FAM221BA6H8Z2 402 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 HMGB1P1B2RPK0 211 aaPredicted RBP13.9□□□□□ -0.18
SKA2-205ENST00000580541 AGPSO00116 658 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 EML2O95834 649 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 SYF2O95926 243 aaKnown RBP13.9□□□□□ -0.18
SKA2-205ENST00000580541 ANXA5P08758 320 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 GIMD1P0DJR0 217 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 TPBGLP0DKB5 382 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 CKMT1AP12532 417 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 CD59P13987 128 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 CKMT2P17540 419 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 SHMT2P34897 504 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 PGGT1BP53609 377 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 EPHA4P54764 986 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 CDKL1Q00532 357 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 PRKG2Q13237 762 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 PLCL1Q15111 1095 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 TSNQ15631 228 aaKnown RBP13.9□□□□□ -0.18
SKA2-205ENST00000580541 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.9□□□□□ -0.18
SKA2-205ENST00000580541 XKR5Q6UX68 686 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 TMEM26Q6ZUK4 368 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 SH2D5Q6ZV89 423 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 CLEC14AQ86T13 490 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 NAXDQ8IW45 347 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 SLC35F3Q8IY50 421 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 CENPLQ8N0S6 344 aaPredicted RBP13.9□□□□□ -0.18
SKA2-205ENST00000580541 SPATA6LQ8N4H0 392 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 OR5AR1Q8NGP9 310 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 NETO1Q8TDF5 533 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 LCN9Q8WX39 176 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 SREK1Q8WXA9 508 aaKnown RBP13.9□□□□□ -0.18
SKA2-205ENST00000580541 CNDP2Q96KP4 475 aaKnown RBP13.9□□□□□ -0.18
SKA2-205ENST00000580541 CAMK1GQ96NX5 476 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 SH3GL2Q99962 352 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 MRPL46Q9H2W6 279 aaKnown RBP13.9□□□□□ -0.18
SKA2-205ENST00000580541 ALG9Q9H6U8 611 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 ARL15Q9NXU5 204 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 SPATA7Q9P0W8 599 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 ANKRD12Q6UB98 2062 aa13.9□□□□□ -0.18
SKA2-205ENST00000580541 ASCC3Q8N3C0 2202 aaKnown RBP13.9□□□□□ -0.18
SKA2-205ENST00000580541 FAM186AA6NE01 2351 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.89□□□□□ -0.19
SKA2-205ENST00000580541 EME2A4GXA9 379 aaPredicted RBP13.89□□□□□ -0.19
SKA2-205ENST00000580541 NPEPPSL1A6NEC2 478 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 MYO1CO00159 1063 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 CDC7O00311 574 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 KERAO60938 352 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 SMIM24O75264 130 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 CDK4P11802 303 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 AMD1P17707 334 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 IRF9Q00978 393 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 PRKAA1Q13131 559 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 SULT1C3Q6IMI6 304 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 ARMC6Q6NXE6 501 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 EXOC3L1Q86VI1 746 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 C4orf33Q8N1A6 199 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 BANPQ8N9N5 519 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 KYQ8NBH2 561 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 OR10G6Q8NH81 332 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 PATE1Q8WXA2 126 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 SLC22A18Q96BI1 424 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 CCDC126Q96EE4 140 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 AHCYL2Q96HN2 611 aaKnown RBP13.89□□□□□ -0.19
SKA2-205ENST00000580541 APOPT1Q96IL0 206 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 ATP6V1G3Q96LB4 118 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 PHOX2BQ99453 314 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 EGFL8Q99944 293 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms