RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 ASF1AQ9Y294 204 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 COPG1Q9Y678 874 aaKnown RBP17.31■□□□□ 0.36
MKS1-209ENST00000580127 HIVEP3Q5T1R4 2406 aa17.31■□□□□ 0.36
MKS1-209ENST00000580127 IGLV3-16A0A075B6K0 115 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 A1L4Q6 167 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 KCNN4O15554 427 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 PSMD3O43242 534 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 KLF7O75840 302 aaPredicted RBP17.3■□□□□ 0.36
MKS1-209ENST00000580127 TJP3O95049 919 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 FTH1P02794 183 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 PTMAP06454 111 aaKnown RBP17.3■□□□□ 0.36
MKS1-209ENST00000580127 RBP3P10745 1247 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 PVRP15151 417 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 ACRV1P26436 265 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 PSMB4P28070 264 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 PDHA2P29803 388 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 ZNF140P52738 457 aaPredicted RBP17.3■□□□□ 0.36
MKS1-209ENST00000580127 CACNG1Q06432 222 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 NR6A1Q15406 480 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 CYP2A13Q16696 494 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 FAM69BQ5VUD6 431 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 MRGPREQ86SM8 312 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 TBC1D21Q8IYX1 336 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 ACTL9Q8TC94 416 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 SPATA13Q96N96 652 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 XKR8Q9H6D3 395 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 MYO9AB2RTY4 2548 aa17.3■□□□□ 0.36
MKS1-209ENST00000580127 ANKRD12Q6UB98 2062 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 ANKUB1A6NFN9 424 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 CBX6O95503 412 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 NSG1P42857 185 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 OTUD4Q01804 1114 aaKnown RBP17.29■□□□□ 0.36
MKS1-209ENST00000580127 PRR30Q53SZ7 412 aaPredicted RBP17.29■□□□□ 0.36
MKS1-209ENST00000580127 UNC5AQ6ZN44 842 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 TTC13Q8NBP0 860 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 OR2Y1Q8NGV0 311 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 COG1Q8WTW3 980 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 DLG3Q92796 817 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 C10orf88Q9H8K7 445 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 ASF1BQ9NVP2 202 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 NLE1Q9NVX2 485 aaPredicted RBP17.29■□□□□ 0.36
MKS1-209ENST00000580127 P4HTMQ9NXG6 502 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 SMARCAL1Q9NZC9 954 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 PLCL2Q9UPR0 1127 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 CCDC88CQ9P219 2028 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 CENPEQ02224 2701 aa17.29■□□□□ 0.36
MKS1-209ENST00000580127 TRBV5-4A0A0C4DH59 114 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 WIPF3A6NGB9 483 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 H7C0S8 307 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 ZSCAN9O15535 394 aaPredicted RBP17.28■□□□□ 0.36
MKS1-209ENST00000580127 GAS8O95995 478 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 CBSLP0DN79 551 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 UGT2B7P16662 529 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 CBSP35520 551 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 GLRBP48167 497 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 ARSFP54793 590 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 NAP1L1P55209 391 aaKnown RBP17.28■□□□□ 0.36
MKS1-209ENST00000580127 SOX8P57073 446 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 AIMP2Q13155 320 aaKnown RBP17.28■□□□□ 0.36
MKS1-209ENST00000580127 PARP6Q2NL67 630 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 NKAIN1Q4KMZ8 207 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 C1orf189Q5VU69 101 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 ARHGEF18Q6ZSZ5 1173 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 CCDC170Q8IYT3 715 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 CLDN19Q8N6F1 224 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 STYXQ8WUJ0 223 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 C19orf60Q96EN9 201 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 OSBPL8Q9BZF1 889 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 SPRTNQ9H040 489 aaPredicted RBP17.28■□□□□ 0.36
MKS1-209ENST00000580127 TDRKHQ9Y2W6 561 aaKnown RBP17.28■□□□□ 0.36
MKS1-209ENST00000580127 PCDHA3Q9Y5H8 950 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 PCDHA13Q9Y5I0 950 aa17.28■□□□□ 0.36
MKS1-209ENST00000580127 A0A0J9YY10 115 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 GOLGA6L9A6NEM1 432 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 ISM1B1AKI9 464 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 KRT86O43790 486 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 AP2A1O95782 977 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 CHRM5P08912 532 aaPredicted RBP17.27■□□□□ 0.36
MKS1-209ENST00000580127 ALAS2P22557 587 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 CYLC1P35663 651 aaPredicted RBP17.27■□□□□ 0.36
MKS1-209ENST00000580127 PPARGP37231 505 aaPredicted RBP17.27■□□□□ 0.36
MKS1-209ENST00000580127 MSLNQ13421 630 aaPredicted RBP17.27■□□□□ 0.36
MKS1-209ENST00000580127 KIR2DS3Q14952 304 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 SKOR2Q2VWA4 1001 aaPredicted RBP17.27■□□□□ 0.36
MKS1-209ENST00000580127 SYTL3Q4VX76 610 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 ZNF385CQ66K41 422 aaPredicted RBP17.27■□□□□ 0.36
MKS1-209ENST00000580127 DENND5AQ6IQ26 1287 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 CCDC110Q8TBZ0 833 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 ELMO1Q92556 727 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 SLC22A18Q96BI1 424 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 CDKN2AIPNLQ96HQ2 116 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 DNAJC1Q96KC8 554 aaKnown RBP17.27■□□□□ 0.36
MKS1-209ENST00000580127 GBP5Q96PP8 586 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 OR2A14Q96R47 310 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 GOLPH3Q9H4A6 298 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 LRRC40Q9H9A6 602 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 ICKQ9UPZ9 632 aa17.27■□□□□ 0.36
MKS1-209ENST00000580127 CCDC78A2IDD5 438 aa17.26■□□□□ 0.35
MKS1-209ENST00000580127 IPO7O95373 1038 aaKnown RBP17.26■□□□□ 0.35
MKS1-209ENST00000580127 RPN2P04844 631 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms