RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 TLK1Q9UKI8 766 aa15.58■□□□□ 0.08
VAPA-204ENST00000577901 PCDHGA6Q9Y5G7 932 aa15.58■□□□□ 0.08
VAPA-204ENST00000577901 COLEC10Q9Y6Z7 277 aa15.58■□□□□ 0.08
VAPA-204ENST00000577901 BLACEA4D250 179 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 IFRD1O00458 451 aaPredicted RBP15.57■□□□□ 0.08
VAPA-204ENST00000577901 DNALI1O14645 258 aaPredicted RBP15.57■□□□□ 0.08
VAPA-204ENST00000577901 PFDN6O15212 129 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 VAPBO95292 243 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 RECKO95980 971 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 MTHFD1P11586 935 aaKnown RBP15.57■□□□□ 0.08
VAPA-204ENST00000577901 NELFEP18615 380 aaKnown RBP15.57■□□□□ 0.08
VAPA-204ENST00000577901 RPA4Q13156 261 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 RNASEH2BQ5TBB1 312 aaKnown RBP15.57■□□□□ 0.08
VAPA-204ENST00000577901 MRNIPQ6NTE8 343 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 CES3Q6UWW8 571 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 SYT10Q6XYQ8 523 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 LURAP1LQ8IV03 231 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 MPP5Q8N3R9 675 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 OTUD6BQ8N6M0 293 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 INSM2Q96T92 566 aaPredicted RBP15.57■□□□□ 0.08
VAPA-204ENST00000577901 RAB33BQ9H082 229 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 LHX9Q9NQ69 397 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 HEBP2Q9Y5Z4 205 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 PRSS21Q9Y6M0 314 aa15.57■□□□□ 0.08
VAPA-204ENST00000577901 C21orf140B9A014 251 aa15.56■□□□□ 0.08
VAPA-204ENST00000577901 LIN7AO14910 233 aaPredicted RBP15.56■□□□□ 0.08
VAPA-204ENST00000577901 FANCGO15287 622 aa15.56■□□□□ 0.08
VAPA-204ENST00000577901 OR1I1O60431 355 aa15.56■□□□□ 0.08
VAPA-204ENST00000577901 NDUFS3O75489 264 aa15.56■□□□□ 0.08
VAPA-204ENST00000577901 TIAF1O95411 115 aa15.56■□□□□ 0.08
VAPA-204ENST00000577901 CD151P48509 253 aa15.56■□□□□ 0.08
VAPA-204ENST00000577901 PLOD1Q02809 727 aaPredicted RBP15.56■□□□□ 0.08
VAPA-204ENST00000577901 DHX34Q14147 1143 aaKnown RBP15.56■□□□□ 0.08
VAPA-204ENST00000577901 SEMA3AQ14563 771 aa15.56■□□□□ 0.08
VAPA-204ENST00000577901 CAPRIN2Q6IMN6 1127 aaKnown RBP15.56■□□□□ 0.08
VAPA-204ENST00000577901 PWWP2BQ6NUJ5 590 aa15.56■□□□□ 0.08
VAPA-204ENST00000577901 KLHL35Q6PF15 583 aa15.56■□□□□ 0.08
VAPA-204ENST00000577901 LDB1Q86U70 411 aaPredicted RBP15.56■□□□□ 0.08
VAPA-204ENST00000577901 HOOK3Q86VS8 718 aa15.56■□□□□ 0.08
VAPA-204ENST00000577901 APLFQ8IW19 511 aaPredicted RBP15.56■□□□□ 0.08
VAPA-204ENST00000577901 ELMO1Q92556 727 aa15.56■□□□□ 0.08
VAPA-204ENST00000577901 ACTL8Q9H568 366 aa15.56■□□□□ 0.08
VAPA-204ENST00000577901 PDE7BQ9NP56 450 aa15.56■□□□□ 0.08
VAPA-204ENST00000577901 CFAP20Q9Y6A4 193 aaKnown RBP15.56■□□□□ 0.08
VAPA-204ENST00000577901 IGHV5-51A0A0C4DH38 117 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 FAM237BA0A1B0GVD1 139 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 SMAPO00193 183 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 PDGFAP04085 211 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 FOLR1P15328 257 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 NDUFS1P28331 727 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 PPP1CAP62136 330 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 TUBB3Q13509 450 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 KCNAB1Q14722 419 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 PLCL1Q15111 1095 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 SYTL3Q4VX76 610 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 IZUMO3Q5VZ72 239 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 KIAA0930Q6ICG6 404 aaPredicted RBP15.55■□□□□ 0.08
VAPA-204ENST00000577901 LRRC6Q86X45 466 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 LILRA3Q8N6C8 439 aaPredicted RBP15.55■□□□□ 0.08
VAPA-204ENST00000577901 SIDT2Q8NBJ9 832 aaKnown RBP15.55■□□□□ 0.08
VAPA-204ENST00000577901 UBXN4Q92575 508 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 SLC41A2Q96JW4 573 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 RMDN2Q96LZ7 410 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 FERD3LQ96RJ6 166 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 TCF12Q99081 682 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 KRT12Q99456 494 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 LRRC4CQ9HCJ2 640 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 SEMA5BQ9P283 1151 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 MARCH4Q9P2E8 410 aaPredicted RBP15.55■□□□□ 0.08
VAPA-204ENST00000577901 RARRES3Q9UL19 164 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 MAD1L1Q9Y6D9 718 aa15.55■□□□□ 0.08
VAPA-204ENST00000577901 PRMT5O14744 637 aaPredicted RBP15.54■□□□□ 0.08
VAPA-204ENST00000577901 TTI1O43156 1089 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 VPS4BO75351 444 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 DNAJB5O75953 348 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 MAGEA3P43357 314 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 THOC5Q13769 683 aaKnown RBP15.54■□□□□ 0.08
VAPA-204ENST00000577901 ANKRD20A4Q4UJ75 823 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 ZNF658BQ4V348 819 aaPredicted RBP15.54■□□□□ 0.08
VAPA-204ENST00000577901 C4orf17Q53FE4 359 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 DNAJC21Q5F1R6 531 aaKnown RBP15.54■□□□□ 0.08
VAPA-204ENST00000577901 RNF187Q5TA31 235 aaPredicted RBP15.54■□□□□ 0.08
VAPA-204ENST00000577901 PTRHD1Q6GMV3 140 aaKnown RBP15.54■□□□□ 0.08
VAPA-204ENST00000577901 GPR150Q8NGU9 434 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 SEC14L1Q92503 715 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 ZNF669Q96BR6 464 aaPredicted RBP15.54■□□□□ 0.08
VAPA-204ENST00000577901 SIGLEC10Q96LC7 697 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 FCRL4Q96PJ5 515 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 RUFY1Q96T51 708 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 CARD6Q9BX69 1037 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 GPR87Q9BY21 358 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 TRIM55Q9BYV6 548 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 OR52A5Q9H2C5 316 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 GNPTGQ9UJJ9 305 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 VPS4AQ9UN37 437 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 TEX15Q9BXT5 2789 aa15.54■□□□□ 0.08
VAPA-204ENST00000577901 USP9YO00507 2555 aaPredicted RBP15.54■□□□□ 0.08
VAPA-204ENST00000577901 NBASA2RRP1 2371 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 TTLL8A6PVC2 850 aa15.53■□□□□ 0.08
VAPA-204ENST00000577901 GOLGA8KD6RF30 607 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms