RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 SPESP1Q6UW49 350 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 TMEM135Q86UB9 458 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 TRIM73Q86UV7 250 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 SLC35F6Q8N357 371 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 OR1L3Q8NH93 324 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 COG1Q8WTW3 980 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 OR2A14Q96R47 310 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 TTC1Q99614 292 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 MENTQ9BUN1 341 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 CARD6Q9BX69 1037 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 MRM3Q9HC36 420 aaKnown RBP12.27□□□□□ -0.44
SSH2-205ENST00000577483 LATS2Q9NRM7 1088 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 KCND1Q9NSA2 647 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 GEMIN8Q9NWZ8 242 aaKnown RBP12.27□□□□□ -0.44
SSH2-205ENST00000577483 BFARQ9NZS9 450 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 ANAPC5Q9UJX4 755 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 SOX13Q9UN79 622 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 NEU2Q9Y3R4 380 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 PCDHGA6Q9Y5G7 932 aa12.27□□□□□ -0.44
SSH2-205ENST00000577483 SEC16AO15027 2179 aa12.27□□□□□ -0.45
SSH2-205ENST00000577483 PIPSLA2A3N6 862 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 TMEM150CB9EJG8 249 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 PYCARD-AS1I3L0S3 204 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 KATNA1O75449 491 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 KRT14P02533 472 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 CHRM5P08912 532 aaPredicted RBP12.26□□□□□ -0.45
SSH2-205ENST00000577483 UGT2B7P16662 529 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 AOAHP28039 575 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 CCR10P46092 362 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 TTPAP49638 278 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 RPS18P62269 152 aaKnown RBP12.26□□□□□ -0.45
SSH2-205ENST00000577483 CDK16Q00536 496 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 PLOD1Q02809 727 aaPredicted RBP12.26□□□□□ -0.45
SSH2-205ENST00000577483 KCNAB2Q13303 367 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 ZIC1Q15915 447 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 CYP1B1Q16678 543 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 DEFB109BQ30KR1 87 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 LCN10Q6JVE6 187 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 ZNF517Q6ZMY9 492 aaPredicted RBP12.26□□□□□ -0.45
SSH2-205ENST00000577483 CDHR3Q6ZTQ4 885 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 CAND1Q86VP6 1230 aaKnown RBP12.26□□□□□ -0.45
SSH2-205ENST00000577483 LMNTD1Q8N9Z9 388 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 CPT1BQ92523 772 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 SLC25A18Q9H1K4 315 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 ADNPQ9H2P0 1102 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 ACTL8Q9H568 366 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 FAM60AQ9NP50 221 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 CIDEBQ9UHD4 219 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 AP3B1O00203 1094 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 CREG1O75629 220 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 SLCO2B1O94956 709 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 VAPBO95292 243 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 MSL3P1P0C860 447 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 RPS3P23396 243 aaKnown RBP eCLIP12.26□□□□□ -0.45
SSH2-205ENST00000577483 RORAP35398 523 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 PPARGP37231 505 aaPredicted RBP12.26□□□□□ -0.45
SSH2-205ENST00000577483 MC1RQ01726 317 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 GRB7Q14451 532 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 DEFB110Q30KQ9 67 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 CTSL3PQ5NE16 218 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 C19orf47Q8N9M1 422 aaKnown RBP12.26□□□□□ -0.45
SSH2-205ENST00000577483 LINC01555Q8NAE3 123 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 OR8K5Q8NH50 307 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 ASZ1Q8WWH4 475 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 MAGOHBQ96A72 148 aaKnown RBP12.26□□□□□ -0.45
SSH2-205ENST00000577483 PBKQ96KB5 322 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 OSBPL9Q96SU4 736 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 FANCEQ9HB96 536 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 IL1RAPL1Q9NZN1 696 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 POLG2Q9UHN1 485 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 KCND3Q9UK17 655 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 PCDHB3Q9Y5E6 796 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 KCNMB2Q9Y691 235 aa12.26□□□□□ -0.45
SSH2-205ENST00000577483 KRT87PA6NCN2 255 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 C21orf140B9A014 251 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 H3BMH7 237 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 PGRMC1O00264 195 aaKnown RBP12.25□□□□□ -0.45
SSH2-205ENST00000577483 ZNF185O15231 689 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 SLC28A2O43868 658 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 F7P08709 466 aaPredicted RBP12.25□□□□□ -0.45
SSH2-205ENST00000577483 SFTPCP11686 197 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 PKLRP30613 574 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 COILP38432 576 aaPredicted RBP12.25□□□□□ -0.45
SSH2-205ENST00000577483 GABRA4P48169 554 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 EIF3BP55884 814 aaKnown RBP12.25□□□□□ -0.45
SSH2-205ENST00000577483 IL10RAQ13651 578 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 TYSND1Q2T9J0 566 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 DNAJC21Q5F1R6 531 aaKnown RBP12.25□□□□□ -0.45
SSH2-205ENST00000577483 PLEKHS1Q5SXH7 462 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 PTRHD1Q6GMV3 140 aaKnown RBP12.25□□□□□ -0.45
SSH2-205ENST00000577483 CCDC137Q6PK04 289 aaKnown RBP12.25□□□□□ -0.45
SSH2-205ENST00000577483 PRICKLE2Q7Z3G6 844 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 FAM20CQ8IXL6 584 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 DSELQ8IZU8 1212 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 AGGF1Q8N302 714 aaeCLIP12.25□□□□□ -0.45
SSH2-205ENST00000577483 CFAP61Q8NHU2 1237 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 LRFN5Q96NI6 719 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 BIRC8Q96P09 236 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 TSSK1BQ9BXA7 367 aa12.25□□□□□ -0.45
SSH2-205ENST00000577483 OR6C2Q9NZP2 312 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms