RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 OR4K2Q8NGD2 314 aa12.88□□□□□ -0.35
COPS3-214ENST00000577246 TFGQ92734 400 aaPredicted RBP12.88□□□□□ -0.35
COPS3-214ENST00000577246 RELTQ969Z4 430 aa12.88□□□□□ -0.35
COPS3-214ENST00000577246 C19orf43Q9BQ61 176 aa12.88□□□□□ -0.35
COPS3-214ENST00000577246 SPRTNQ9H040 489 aaPredicted RBP12.88□□□□□ -0.35
COPS3-214ENST00000577246 FAM60AQ9NP50 221 aa12.88□□□□□ -0.35
COPS3-214ENST00000577246 SLC6A20Q9NP91 592 aa12.88□□□□□ -0.35
COPS3-214ENST00000577246 POLG2Q9UHN1 485 aa12.88□□□□□ -0.35
COPS3-214ENST00000577246 NXT1Q9UKK6 140 aaKnown RBP12.88□□□□□ -0.35
COPS3-214ENST00000577246 TRHDEQ9UKU6 1024 aa12.88□□□□□ -0.35
COPS3-214ENST00000577246 PLCL2Q9UPR0 1127 aa12.88□□□□□ -0.35
COPS3-214ENST00000577246 LUC7L2Q9Y383 392 aaKnown RBP12.88□□□□□ -0.35
COPS3-214ENST00000577246 CSAG2Q9Y5P2 127 aa12.88□□□□□ -0.35
COPS3-214ENST00000577246 ARL5AQ9Y689 179 aa12.88□□□□□ -0.35
COPS3-214ENST00000577246 PCSK5Q92824 1860 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 A0A0J9YY10 115 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 AGAP14A8MT82 685 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 GOLGA6L22H0YM25 854 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 SGTAO43765 313 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 JRKO75564 520 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 KRT38O76015 456 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 ANXA9O76027 345 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 CRTAMO95727 393 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 UGT2B7P16662 529 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 INAQ16352 499 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 SLC5A12Q1EHB4 618 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 DEFB110Q30KQ9 67 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 TUBB8Q3ZCM7 444 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 NXPE1Q8N323 547 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 P3H4Q92791 437 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 OXNAD1Q96HP4 312 aaPredicted RBP12.87□□□□□ -0.35
COPS3-214ENST00000577246 GBP4Q96PP9 640 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 FERMT1Q9BQL6 677 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 XKR8Q9H6D3 395 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 OR6C2Q9NZP2 312 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 RSPH14Q9UHP6 348 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 FKBPLQ9UIM3 349 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 CAPN11Q9UMQ6 739 aa12.87□□□□□ -0.35
COPS3-214ENST00000577246 POLEQ07864 2286 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 A0A1B0GX78 115 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 CNOT3O75175 753 aaKnown RBP12.86□□□□□ -0.35
COPS3-214ENST00000577246 TMEM253P0C7T8 217 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 COX6B1P14854 86 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 ALAS2P22557 587 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 SLC1A1P43005 524 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 GABRA4P48169 554 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 GEMP55040 296 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 TPM4P67936 248 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 PRKG2Q13237 762 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 SLC18A3Q16572 532 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.86□□□□□ -0.35
COPS3-214ENST00000577246 GPR33Q49SQ1 333 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 ISLR2Q6UXK2 745 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 RPTNQ6XPR3 784 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 BNC2Q6ZN30 1099 aaPredicted RBP12.86□□□□□ -0.35
COPS3-214ENST00000577246 OVCH1Q7RTY7 1134 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 SNX20Q7Z614 316 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 TRIM73Q86UV7 250 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 ZNF567Q8N184 647 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 PHC3Q8NDX5 983 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 NAT14Q8WUY8 206 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 RNF25Q96BH1 459 aaPredicted RBP12.86□□□□□ -0.35
COPS3-214ENST00000577246 LRRC45Q96CN5 670 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 LURAP1Q96LR2 239 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 OR2A14Q96R47 310 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 LMF1Q96S06 567 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 SEMA3GQ9NS98 782 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 NENFQ9UMX5 172 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 ICKQ9UPZ9 632 aa12.86□□□□□ -0.35
COPS3-214ENST00000577246 CROCCQ5TZA2 2017 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 HACD1B0YJ81 288 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 MASP2O00187 686 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 QSOX1O00391 747 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 MBD3O95983 291 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 CHRM5P08912 532 aaPredicted RBP12.85□□□□□ -0.35
COPS3-214ENST00000577246 XIAPP98170 497 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 FANCCQ00597 558 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 MFAP5Q13361 173 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 PTPRCAPQ14761 206 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 KIR2DS3Q14952 304 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 ZIC1Q15915 447 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 RBBP7Q16576 425 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 VWA2Q5GFL6 755 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 YOD1Q5VVQ6 348 aaPredicted RBP12.85□□□□□ -0.35
COPS3-214ENST00000577246 ITPRIPL1Q6GPH6 555 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 UNC5AQ6ZN44 842 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 RHOT2Q8IXI1 618 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 TBC1D21Q8IYX1 336 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 THOC3Q96J01 351 aaKnown RBP12.85□□□□□ -0.35
COPS3-214ENST00000577246 MAGEB10Q96LZ2 347 aaPredicted RBP12.85□□□□□ -0.35
COPS3-214ENST00000577246 TRIM56Q9BRZ2 755 aaKnown RBP12.85□□□□□ -0.35
COPS3-214ENST00000577246 FICDQ9BVA6 458 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 SLC26A1Q9H2B4 701 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 ZDHHC3Q9NYG2 299 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 IL1RAPL1Q9NZN1 696 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 ASF1AQ9Y294 204 aa12.85□□□□□ -0.35
COPS3-214ENST00000577246 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.85□□□□□ -0.35
COPS3-214ENST00000577246 IGLV3-16A0A075B6K0 115 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 DYTNA2CJ06 578 aa12.84□□□□□ -0.35
COPS3-214ENST00000577246 SOCS6O14544 535 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms