RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 WISP3O95389 354 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-217ENST00000575711 TSPAN12O95859 305 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 PROS1P07225 676 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 TYRP1P17643 537 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 CD1CP29017 333 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 TYK2P29597 1187 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 SHMT2P34897 504 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 INSM1Q01101 510 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-217ENST00000575711 CLPPQ16740 277 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-217ENST00000575711 NKAIN2Q5VXU1 208 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 UBE2R2Q712K3 238 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-217ENST00000575711 TBC1D1Q86TI0 1168 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-217ENST00000575711 AMIGO1Q86WK6 493 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 OR4E2Q8NGC2 313 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 ANKRD49Q8WVL7 239 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 ANKRD7Q92527 254 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 RAB11FIP5Q9BXF6 653 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 SRMSQ9H3Y6 488 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 TLK1Q9UKI8 766 aa13.59□□□□□ -0.23
RPAIN-217ENST00000575711 A0A087X1B8 175 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 SMIM23A6NLE4 172 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 ARHGEF33A8MVX0 844 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 NTN3O00634 580 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-217ENST00000575711 CPNE6O95741 557 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 ALDOAP04075 364 aaKnown RBP13.58□□□□□ -0.24
RPAIN-217ENST00000575711 SLC35E2BP0CK96 405 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 CCDC166P0CW27 439 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 CYP2A7P20853 494 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 SLC26A3P40879 764 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 SLCO1A2P46721 670 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 CAPZBP47756 277 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 PRKAA1Q13131 559 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 CSHL1Q14406 222 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.58□□□□□ -0.24
RPAIN-217ENST00000575711 ARMC6Q6NXE6 501 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 RBM44Q6ZP01 1051 aaKnown RBP13.58□□□□□ -0.24
RPAIN-217ENST00000575711 USP53Q70EK8 1073 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 DGLUCYQ7Z3D6 616 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 OOSP2Q86WS3 158 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 TDRPQ86YL5 185 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 FBXO15Q8NCQ5 510 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-217ENST00000575711 OR2W6PQ8NHA6 318 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 EPS8L3Q8TE67 593 aaKnown RBP13.58□□□□□ -0.24
RPAIN-217ENST00000575711 ADAMTS14Q8WXS8 1223 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 NCSTNQ92542 709 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 RSC1A1Q92681 617 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 ISL2Q96A47 359 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 DPYSL5Q9BPU6 564 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 SLC12A9Q9BXP2 914 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 DERL2Q9GZP9 239 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 XKR8Q9H6D3 395 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 TBK1Q9UHD2 729 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 ATXN7L1Q9ULK2 861 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-217ENST00000575711 PLAGL1Q9UM63 463 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 ICKQ9UPZ9 632 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 ACOT9Q9Y305 439 aa13.58□□□□□ -0.24
RPAIN-217ENST00000575711 A0A096LPK6 155 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 OR6C74A6NCV1 312 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 OR5K3A6NET4 321 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 D6RAR5 112 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 MYO1CO00159 1063 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 BTN3A1O00481 513 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 RASGRF2O14827 1237 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 CASC3O15234 703 aaKnown RBP13.57□□□□□ -0.24
RPAIN-217ENST00000575711 CDH16O75309 829 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 SYF2O95926 243 aaKnown RBP13.57□□□□□ -0.24
RPAIN-217ENST00000575711 MPOP05164 745 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 C2P06681 752 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 HIST1H2AGP0C0S8 130 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-217ENST00000575711 HIST1H2ADP20671 130 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 MAGEA12P43365 314 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 RAB28P51157 221 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 ATP6V0D1P61421 351 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 SQSTM1Q13501 440 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 GRB7Q14451 532 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 RASA2Q15283 850 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 HES3Q5TGS1 186 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 WDR74Q6RFH5 385 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-217ENST00000575711 TIFABQ6ZNK6 161 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 PLXDC1Q8IUK5 500 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 RASGRP3Q8IV61 690 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 OR9A1PQ8NGU1 263 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 MCOLN3Q8TDD5 553 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 HNRNPLLQ8WVV9 542 aaKnown RBP13.57□□□□□ -0.24
RPAIN-217ENST00000575711 HIST1H2AHQ96KK5 128 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 UBXN10Q96LJ8 280 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 HIST1H2AJQ99878 128 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 H2AFJQ9BTM1 129 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 TRIM54Q9BYV2 358 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 ROPN1BQ9BZX4 212 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-217ENST00000575711 VPS11Q9H270 941 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 ROPN1Q9HAT0 212 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-217ENST00000575711 RDH14Q9HBH5 336 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 PARVBQ9HBI1 364 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 ARGLU1Q9NWB6 273 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-217ENST00000575711 HRASLS2Q9NWW9 162 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 OR6C2Q9NZP2 312 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 OGFRQ9NZT2 677 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 SPATA7Q9P0W8 599 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms