RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 CTBP1Q13363 440 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 CRYMQ14894 314 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 TGIF1Q15583 401 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 ZNF789Q5FWF6 425 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 HP1BP3Q5SSJ5 553 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-216ENST00000575599 DCAF12Q5T6F0 453 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 BROXQ5VW32 411 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 CENPUQ71F23 418 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 OTOAQ7RTW8 1153 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 GSPT2Q8IYD1 628 aaKnown RBP12.88□□□□□ -0.35
RPAIN-216ENST00000575599 SLC22A15Q8IZD6 547 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 UNC5BQ8IZJ1 945 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 CFAP61Q8NHU2 1237 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 GSDMBQ8TAX9 411 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 SKA2Q8WVK7 121 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-216ENST00000575599 BIRC8Q96P09 236 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 TCF12Q99081 682 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 MAP3K3Q99759 626 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 DDA1Q9BW61 102 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 DPH1Q9BZG8 443 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 APMAPQ9HDC9 416 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 FBXO6Q9NRD1 293 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-216ENST00000575599 TSR3Q9UJK0 312 aaKnown RBP12.88□□□□□ -0.35
RPAIN-216ENST00000575599 LHX6Q9UPM6 363 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 CHMP2BQ9UQN3 213 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 CDYLQ9Y232 598 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 VPS9D1Q9Y2B5 631 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 ADAMTS20P59510 1910 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 ZZEF1O43149 2961 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 ANKRD11Q6UB99 2663 aaPredicted RBP12.87□□□□□ -0.35
RPAIN-216ENST00000575599 IGHV5-51A0A0C4DH38 117 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 CCDC151A5D8V7 595 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 TLCD2A6NGC4 264 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 E5RI56 91 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 BTN3A1O00481 513 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 GPC4O75487 556 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 ESR1P03372 595 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 LIPCP11150 499 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 CD82P27701 267 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 ARL4DP49703 201 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 KPNA2P52292 529 aaKnown RBP12.87□□□□□ -0.35
RPAIN-216ENST00000575599 ABRQ12979 859 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 SLMAPQ14BN4 828 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 HIF1AQ16665 826 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 HSP90AA5PQ58FG0 334 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 EMBQ6PCB8 327 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 ZDHHC24Q6UX98 284 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 CEACAM20Q6UY09 585 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 KCNMB4Q86W47 210 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 AMIGO1Q86WK6 493 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 TBC1D21Q8IYX1 336 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 OR5K2Q8NHB8 316 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 CALML6Q8TD86 181 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 RNF31Q96EP0 1072 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 CFAP36Q96G28 342 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 PPM1MQ96MI6 270 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 EBNA1BP2Q99848 306 aaKnown RBP12.87□□□□□ -0.35
RPAIN-216ENST00000575599 FAM167BQ9BTA0 163 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 ASPSCR1Q9BZE9 553 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 TFB2MQ9H5Q4 396 aaKnown RBP12.87□□□□□ -0.35
RPAIN-216ENST00000575599 IARS2Q9NSE4 1012 aaKnown RBP12.87□□□□□ -0.35
RPAIN-216ENST00000575599 ZDHHC18Q9NUE0 388 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 INTS10Q9NVR2 710 aaKnown RBP12.87□□□□□ -0.35
RPAIN-216ENST00000575599 SIDT1Q9NXL6 827 aaKnown RBP12.87□□□□□ -0.35
RPAIN-216ENST00000575599 ACSL6Q9UKU0 697 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 PLAGL1Q9UM63 463 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 ICKQ9UPZ9 632 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 PCDHGA3Q9Y5H0 932 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 FAM169AQ9Y6X4 670 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 PKD1L2Q7Z442 2459 aa12.87□□□□□ -0.35
RPAIN-216ENST00000575599 H3BMM5 538 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 STMND1H3BQB6 276 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 BTN3A3O00478 584 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 DYNC1I1O14576 645 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 KPNA5O15131 536 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 POLR1CO15160 346 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-216ENST00000575599 SLCO2B1O94956 709 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 S1PR4O95977 384 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 ERVK-10P10266 1014 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 PKMP14618 531 aaKnown RBP12.86□□□□□ -0.35
RPAIN-216ENST00000575599 CHRM3P20309 590 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 CDH3P22223 829 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 ELK3P41970 407 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 CXADRP78310 365 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 MPP1Q00013 466 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 KCNAB1Q14722 419 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 SPANXN3Q5MJ09 141 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 FBXO38Q6PIJ6 1188 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 IGDCC3Q8IVU1 814 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 SIDT2Q8NBJ9 832 aaKnown RBP12.86□□□□□ -0.35
RPAIN-216ENST00000575599 KLHL6Q8WZ60 621 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 ELMO2Q96JJ3 720 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 TEFMQ96QE5 360 aaKnown RBP12.86□□□□□ -0.35
RPAIN-216ENST00000575599 OR6C1Q96RD1 312 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 CD180Q99467 661 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 B3GNT4Q9C0J1 378 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 CCDC68Q9H2F9 335 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 FBXO8Q9NRD0 319 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 SOHLH2Q9NX45 425 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 CIDEBQ9UHD4 219 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms