RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 A0A087X0T9 212 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 TRAV17A0A0B4J275 112 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 DYTNA2CJ06 578 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 C5orf60A6NFR6 353 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 PCDH17O14917 1159 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 BUD23O43709 281 aaKnown RBP8.67□□□□□ -1.02
SMG6-218ENST00000575454 ONECUT2O95948 504 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 FAM228BP0C875 321 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 MYBL2P10244 700 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 ATP1B2P14415 290 aaPredicted RBP8.67□□□□□ -1.02
SMG6-218ENST00000575454 PRLHRP49683 370 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 CASP6P55212 293 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 MAP1AP78559 2803 aaPredicted RBP8.67□□□□□ -1.02
SMG6-218ENST00000575454 MFAP5Q13361 173 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 SLC9A5Q14940 896 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 TAF1AQ15573 450 aaPredicted RBP8.67□□□□□ -1.02
SMG6-218ENST00000575454 LRRC38Q5VT99 294 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 YOD1Q5VVQ6 348 aaPredicted RBP8.67□□□□□ -1.02
SMG6-218ENST00000575454 XKRXQ6PP77 449 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 OVCH1Q7RTY7 1134 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 MRGPRGQ86SM5 289 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 DAAM2Q86T65 1068 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 RFX6Q8HWS3 928 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 PHC3Q8NDX5 983 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 IPMKQ8NFU5 416 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 OR1N1Q8NGS0 311 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 ITLN2Q8WWU7 325 aaPredicted RBP8.67□□□□□ -1.02
SMG6-218ENST00000575454 TFGQ92734 400 aaPredicted RBP8.67□□□□□ -1.02
SMG6-218ENST00000575454 MRGPRX2Q96LB1 330 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 MAGEB10Q96LZ2 347 aaPredicted RBP8.67□□□□□ -1.02
SMG6-218ENST00000575454 C19orf43Q9BQ61 176 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 TRIM56Q9BRZ2 755 aaKnown RBP8.67□□□□□ -1.02
SMG6-218ENST00000575454 SLC26A1Q9H2B4 701 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 OR52A5Q9H2C5 316 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 COG4Q9H9E3 785 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 FAM60AQ9NP50 221 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 SLC6A20Q9NP91 592 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 SEMA3GQ9NS98 782 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 KLHL8Q9P2G9 620 aaPredicted RBP8.67□□□□□ -1.02
SMG6-218ENST00000575454 DHCR7Q9UBM7 475 aaKnown RBP8.67□□□□□ -1.02
SMG6-218ENST00000575454 POLG2Q9UHN1 485 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 CRLS1Q9UJA2 301 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 ITGB1BP2Q9UKP3 347 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 TRHDEQ9UKU6 1024 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 SHANK1Q9Y566 2161 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 CSAG2Q9Y5P2 127 aa8.67□□□□□ -1.02
SMG6-218ENST00000575454 TRGV8A0A0C4DH27 118 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 A0A0J9YY10 115 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 A0A1B0GTH6 734 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 A0A1B0GX78 115 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 C3orf70A6NLC5 250 aaPredicted RBP8.66□□□□□ -1.02
SMG6-218ENST00000575454 AGAP14A8MT82 685 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 SOCS6O14544 535 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 SGTAO43765 313 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 CNOT3O75175 753 aaKnown RBP8.66□□□□□ -1.02
SMG6-218ENST00000575454 USP1O94782 785 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 CRTAMO95727 393 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 CRYABP02511 175 aaKnown RBP8.66□□□□□ -1.02
SMG6-218ENST00000575454 UGT2B7P16662 529 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 NFKB1P19838 968 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 ITGALP20701 1170 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 AGAP20933 346 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 FDXRP22570 491 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 CD68P34810 354 aaPredicted RBP8.66□□□□□ -1.02
SMG6-218ENST00000575454 ARHGAP25P42331 645 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 CHRNA4P43681 627 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 GABRA4P48169 554 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 CARSP49589 748 aaKnown RBP8.66□□□□□ -1.02
SMG6-218ENST00000575454 ARG2P78540 354 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 ZBED6P86452 979 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 RBPJQ06330 500 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 PRKG2Q13237 762 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 BOP1Q14137 746 aaKnown RBP8.66□□□□□ -1.02
SMG6-218ENST00000575454 TFDP2Q14188 446 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 KIR2DS3Q14952 304 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 NOMO1Q15155 1222 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 RBBP7Q16576 425 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 TUBB8Q3ZCM7 444 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 GPR33Q49SQ1 333 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 ZNF324BQ6AW86 544 aaPredicted RBP8.66□□□□□ -1.02
SMG6-218ENST00000575454 KIRREL2Q6UWL6 708 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 TMEM207Q6UWW9 146 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 GFRALQ6UXV0 394 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 SPNS3Q6ZMD2 512 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 UNC5AQ6ZN44 842 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 LINC00696Q6ZRV3 163 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 PID1Q7Z2X4 250 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 SNX20Q7Z614 316 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 DNAJC22Q8N4W6 341 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 LILRA3Q8N6C8 439 aaPredicted RBP8.66□□□□□ -1.02
SMG6-218ENST00000575454 OR4K2Q8NGD2 314 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 NR4A3Q92570 626 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 THOC3Q96J01 351 aaKnown RBP8.66□□□□□ -1.02
SMG6-218ENST00000575454 BPIFA3Q9BQP9 254 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 HGH1Q9BTY7 390 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 XKR8Q9H6D3 395 aa8.66□□□□□ -1.02
SMG6-218ENST00000575454 DDX56Q9NY93 547 aaKnown RBP8.66□□□□□ -1.02
SMG6-218ENST00000575454 ANKHD1Q8IWZ3 2542 aaKnown RBP8.65□□□□□ -1.02
SMG6-218ENST00000575454 MASP2O00187 686 aa8.65□□□□□ -1.02
SMG6-218ENST00000575454 CCL21O00585 134 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms