RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 C3orf38Q5JPI3 329 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 RBM20Q5T481 1227 aaKnown RBP12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 CYB5D1Q6P9G0 228 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 ZNF574Q6ZN55 896 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 TMPRSS9Q7Z410 1059 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 MARCH9Q86YJ5 346 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 CARFQ8N187 725 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 MYO1HQ8N1T3 1032 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 PPM1NQ8N819 430 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 JPH3Q8WXH2 748 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 RBBP8Q99708 897 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 CDC42EP4Q9H3Q1 356 aaKnown RBP12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 SYTL2Q9HCH5 934 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 NINJ2Q9NZG7 142 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 OGFRQ9NZT2 677 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 GALPQ9UBC7 116 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 KLHL3Q9UH77 587 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 LNPEPQ9UIQ6 1025 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 SATB2Q9UPW6 733 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 MED16Q9Y2X0 877 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 LOXL2Q9Y4K0 774 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 PCDHGA8Q9Y5G5 932 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 PSAT1Q9Y617 370 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 IKBKGQ9Y6K9 419 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 PCM1Q15154 2024 aa12.4□□□□□ -0.42
TRAPPC1-206ENST00000573989 PIPSLA2A3N6 862 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 GSAPA4D1B5 854 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 TLCD2A6NGC4 264 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 ZNF839A8K0R7 811 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 A8MU76 341 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 C2orf74A8MZ97 194 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 PSIP1O75475 530 aaKnown RBP12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 C1orf105O95561 183 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 ACSL3O95573 720 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 POLR2CP19387 275 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 SAT1P21673 171 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 FDXRP22570 491 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 MPSTP25325 297 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 HSD17B2P37059 387 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 ABCG1P45844 678 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 ARL4DP49703 201 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 CDKN2DP55273 166 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 GFERP55789 205 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 POU4F1Q01851 419 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 TMEM164Q5U3C3 297 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 CACHD1Q5VU97 1274 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 FOXR1Q6PIV2 292 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 UNQ6494/PRO21346Q6UXR6 183 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 TRMT10CQ7L0Y3 403 aaKnown RBP12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 PRSS42Q7Z5A4 293 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 ARHGAP22Q7Z5H3 698 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 CPNE9Q8IYJ1 553 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 NKAPQ8N5F7 415 aaKnown RBP12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 LRRN4CLQ8ND94 238 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 RCBTB1Q8NDN9 531 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 GIMAP7Q8NHV1 300 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 UBXN4Q92575 508 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 SLC22A18Q96BI1 424 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 SLC30A3Q99726 388 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 POPDC3Q9HBV1 291 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 SMYD2Q9NRG4 433 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 TMEM9Q9P0T7 183 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 TSR3Q9UJK0 312 aaKnown RBP12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 NFS1Q9Y697 457 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 ANKRD12Q6UB98 2062 aa12.39□□□□□ -0.43
TRAPPC1-206ENST00000573989 A0A087WUV0 522 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 TMEM8BA6NDV4 472 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 CXorf49A8MYA2 514 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 RASGRF2O14827 1237 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 MPOP05164 745 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 C8GP07360 202 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 STMN1P16949 149 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 CYP2A7P20853 494 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 CDH3P22223 829 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 TNFRSF8P28908 595 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 SP140Q13342 867 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 KIR2DS3Q14952 304 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 PAQR3Q6TCH7 311 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 IGF2-ASQ6U949 168 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 FAM92BQ6ZTR7 304 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 FAM129CQ86XR2 697 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 KMT5CQ86Y97 462 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 CNPY4Q8N129 248 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 FBXO15Q8NCQ5 510 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 MCOLN3Q8TDD5 553 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 EEF1AKMT1Q8WVE0 214 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 ASB11Q8WXH4 323 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 GATA6Q92908 595 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 LINGO1Q96FE5 620 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 FUT8Q9BYC5 575 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 TRIM54Q9BYV2 358 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 ZNF768Q9H5H4 540 aaKnown RBP12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 XKR8Q9H6D3 395 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 CCDC86Q9H6F5 360 aaKnown RBP12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 ACSS3Q9H6R3 686 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 THSD1Q9NS62 852 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 SPATA7Q9P0W8 599 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 DKK4Q9UBT3 224 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 ICKQ9UPZ9 632 aa12.38□□□□□ -0.43
TRAPPC1-206ENST00000573989 BTN3A3O00478 584 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms