RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ZFC3H1O60293 1989 aaKnown RBP10.73□□□□□ -0.69
CHD3-216ENST00000573936 ARHGEF17Q96PE2 2063 aaPredicted RBP10.72□□□□□ -0.69
CHD3-216ENST00000573936 IGHV5-10-1A0A0J9YXX1 117 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 TCRBV9S1A1TA0A576 114 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 OR5K3A6NET4 321 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 FAM159BA6NKW6 160 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 HGSO14964 777 aaPredicted RBP10.72□□□□□ -0.69
CHD3-216ENST00000573936 TOX3O15405 576 aaPredicted RBP10.72□□□□□ -0.69
CHD3-216ENST00000573936 CAPN5O15484 640 aaPredicted RBP10.72□□□□□ -0.69
CHD3-216ENST00000573936 C9P02748 559 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 THRAP10827 490 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 ITPKBP27987 946 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 SHMT2P34897 504 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 CAPZBP47756 277 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 RGS4P49798 205 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 GPX6P59796 221 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 CFHR1Q03591 330 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 RTP5Q14D33 572 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 HECTD2Q5U5R9 776 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 ZNF574Q6ZN55 896 aaPredicted RBP10.72□□□□□ -0.69
CHD3-216ENST00000573936 RAB11FIP2Q7L804 512 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 AMIGO1Q86WK6 493 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 VRK3Q8IV63 474 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 DCUN1D3Q8IWE4 304 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 CARFQ8N187 725 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 FBXO39Q8N4B4 442 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 RAB42Q8N4Z0 105 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 GPATCH11Q8N954 259 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 EIF1ADQ8N9N8 165 aaKnown RBP10.72□□□□□ -0.69
CHD3-216ENST00000573936 SIDT2Q8NBJ9 832 aaKnown RBP10.72□□□□□ -0.69
CHD3-216ENST00000573936 LSM14AQ8ND56 463 aaKnown RBP10.72□□□□□ -0.69
CHD3-216ENST00000573936 OR4E2Q8NGC2 313 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 OR52E1Q8NGJ3 308 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 OR5AR1Q8NGP9 310 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 CFAP61Q8NHU2 1237 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 WDR36Q8NI36 951 aaKnown RBP10.72□□□□□ -0.69
CHD3-216ENST00000573936 ATXN7L3BQ96GX2 97 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 CCDC74BQ96LY2 380 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 CD180Q99467 661 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 GPR21Q99679 349 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 CPNE1Q99829 537 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 HGH1Q9BTY7 390 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 SEMA6CQ9H3T2 930 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 POLR1BQ9H9Y6 1135 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 HRASLS2Q9NWW9 162 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 OGFRQ9NZT2 677 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 TDRKHQ9Y2W6 561 aaKnown RBP10.72□□□□□ -0.69
CHD3-216ENST00000573936 NAV2Q8IVL1 2488 aa10.72□□□□□ -0.69
CHD3-216ENST00000573936 OR6C74A6NCV1 312 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 CASC3O15234 703 aaKnown RBP10.71□□□□□ -0.69
CHD3-216ENST00000573936 MATN4O95460 622 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 C1orf105O95561 183 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 F7P08709 466 aaPredicted RBP10.71□□□□□ -0.69
CHD3-216ENST00000573936 CSF2RBP32927 897 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 CSTF2P33240 577 aaKnown RBP eCLIP10.71□□□□□ -0.69
CHD3-216ENST00000573936 SPRP35270 261 aaPredicted RBP10.71□□□□□ -0.69
CHD3-216ENST00000573936 GP5P40197 560 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 EIF2S3P41091 472 aaKnown RBP10.71□□□□□ -0.69
CHD3-216ENST00000573936 MLLT3P42568 568 aaPredicted RBP10.71□□□□□ -0.69
CHD3-216ENST00000573936 LSSP48449 732 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 PDX1P52945 283 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 MN1Q10571 1320 aaPredicted RBP10.71□□□□□ -0.69
CHD3-216ENST00000573936 PRKG2Q13237 762 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 PDAP1Q13442 181 aaKnown RBP10.71□□□□□ -0.69
CHD3-216ENST00000573936 KYNUQ16719 465 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 KLHL38Q2WGJ6 581 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 ACSBG2Q5FVE4 666 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 GRTP1Q5TC63 336 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 IRGCQ6NXR0 463 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 TMPRSS9Q7Z410 1059 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 B3GNT8Q7Z7M8 397 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 ZC3HC1Q86WB0 502 aaKnown RBP10.71□□□□□ -0.69
CHD3-216ENST00000573936 CTAGE3PQ8IX95 158 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 AGBL5Q8NDL9 886 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 MYRIPQ8NFW9 859 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 CD200R1Q8TD46 325 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 FBF1Q8TES7 1133 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.71□□□□□ -0.692e-6■■■■■ 29
CHD3-216ENST00000573936 RAD51AP1Q96B01 352 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 FAM136AQ96C01 138 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 VPS39Q96JC1 886 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 ELMO2Q96JJ3 720 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 TGM7Q96PF1 710 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 NDNQ99608 321 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 RAB11FIP5Q9BXF6 653 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 RHOJQ9H4E5 214 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 OR6C2Q9NZP2 312 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 GALPQ9UBC7 116 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 SLC39A10Q9ULF5 831 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 NFU1Q9UMS0 254 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 MED16Q9Y2X0 877 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 PCDHGA8Q9Y5G5 932 aa10.71□□□□□ -0.69
CHD3-216ENST00000573936 ZNF462Q96JM2 2506 aa10.71□□□□□ -0.7
CHD3-216ENST00000573936 TENM4Q6N022 2769 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 FAM95CA0A1B0GW59 222 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 C2orf74A8MZ97 194 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 PLD2O14939 933 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 CTIFO43310 598 aaKnown RBP10.7□□□□□ -0.7
CHD3-216ENST00000573936 ZBTB14O43829 449 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 CATP04040 527 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms