RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 NCSTNQ92542 709 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 ELMO1Q92556 727 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 DCUN1D1Q96GG9 259 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 TGM7Q96PF1 710 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 MAP3K3Q99759 626 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 CMKLR1Q99788 373 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 HGH1Q9BTY7 390 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 CARD6Q9BX69 1037 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 SLC6A16Q9GZN6 736 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 SAP130Q9H0E3 1048 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 TFB2MQ9H5Q4 396 aaKnown RBP8.43□□□□□ -1.06
SMG6-210ENST00000572205 STN1Q9H668 368 aaKnown RBP8.43□□□□□ -1.06
SMG6-210ENST00000572205 SYNPO2LQ9H987 977 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 LATS2Q9NRM7 1088 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 SPHK1Q9NYA1 384 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 PILRAQ9UKJ1 303 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 BTRCQ9Y297 605 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 TMEM184BQ9Y519 407 aaPredicted RBP8.43□□□□□ -1.06
SMG6-210ENST00000572205 NFS1Q9Y697 457 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 TEX264Q9Y6I9 313 aa8.43□□□□□ -1.06
SMG6-210ENST00000572205 COL6A6A6NMZ7 2263 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 TEX51A0A1B0GUA7 166 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 TLCD2A6NGC4 264 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 SDR42E2A6NKP2 422 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 EFCAB7A8K855 629 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 A8MU76 341 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 AP3B1O00203 1094 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 QSOX1O00391 747 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 PRICKLE3O43900 615 aaPredicted RBP8.42□□□□□ -1.06
SMG6-210ENST00000572205 FTH1P02794 183 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 JMJD7P0C870 316 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 FOLR1P15328 257 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 ITGB6P18564 788 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 PKLRP30613 574 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 ABCG1P45844 678 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 ITGA8P53708 1063 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 MAPK10P53779 464 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 DR1Q01658 176 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 C2orf54Q08AI8 447 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 ABRQ12979 859 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 DHX34Q14147 1143 aaKnown RBP8.42□□□□□ -1.06
SMG6-210ENST00000572205 KCNAB1Q14722 419 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 MORF4L2Q15014 288 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 TRADDQ15628 312 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 ZIC1Q15915 447 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 AARS2Q5JTZ9 985 aaKnown RBP8.42□□□□□ -1.06
SMG6-210ENST00000572205 SNAP47Q5SQN1 464 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 UBAP2Q5T6F2 1119 aaKnown RBP8.42□□□□□ -1.06
SMG6-210ENST00000572205 ZNF470Q6ECI4 717 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 TRMT10BQ6PF06 316 aaKnown RBP8.42□□□□□ -1.06
SMG6-210ENST00000572205 FOXR1Q6PIV2 292 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 ZDHHC24Q6UX98 284 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 SYT10Q6XYQ8 523 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 FAM92BQ6ZTR7 304 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 SYDE1Q6ZW31 735 aaPredicted RBP8.42□□□□□ -1.06
SMG6-210ENST00000572205 PLXDC1Q8IUK5 500 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 D2HGDHQ8N465 521 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 PHC3Q8NDX5 983 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 HNRNPLLQ8WVV9 542 aaKnown RBP8.42□□□□□ -1.06
SMG6-210ENST00000572205 KCNE4Q8WWG9 221 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 SEC14L1Q92503 715 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 TFGQ92734 400 aaPredicted RBP8.42□□□□□ -1.06
SMG6-210ENST00000572205 NKD1Q969G9 470 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 NAF1Q96HR8 494 aaKnown RBP8.42□□□□□ -1.06
SMG6-210ENST00000572205 EBNA1BP2Q99848 306 aaKnown RBP8.42□□□□□ -1.06
SMG6-210ENST00000572205 CTRCQ99895 268 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 DPH1Q9BZG8 443 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 XKR8Q9H6D3 395 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 MVB12BQ9H7P6 319 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 CPNE5Q9HCH3 593 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 FBXO8Q9NRD0 319 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 KLHL3Q9UH77 587 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 ASIC3Q9UHC3 531 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 RPS6KL1Q9Y6S9 549 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 FAM169AQ9Y6X4 670 aa8.42□□□□□ -1.06
SMG6-210ENST00000572205 FLNCQ14315 2725 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 SEC16AO15027 2179 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 A0A1W2PPV9 198 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 OR6C74A6NCV1 312 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 K7ENP7 123 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 NRP2O60462 931 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 WISP3O95389 354 aaPredicted RBP8.41□□□□□ -1.06
SMG6-210ENST00000572205 MATN4O95460 622 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 TSPAN12O95859 305 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 ESR1P03372 595 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 CTSBP07858 339 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 OR56A5P0C7T3 313 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 MSL3P1P0C860 447 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 EBLN1P0CF75 366 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 FGF5P12034 268 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 ST6GAL1P15907 406 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 PGAM1P18669 254 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 RBMS1P29558 406 aaKnown RBP8.41□□□□□ -1.06
SMG6-210ENST00000572205 ATP5DP30049 168 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 EIF3BP55884 814 aaKnown RBP8.41□□□□□ -1.06
SMG6-210ENST00000572205 CTBP1Q13363 440 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 FRG1Q14331 258 aaKnown RBP8.41□□□□□ -1.06
SMG6-210ENST00000572205 BRD3Q15059 726 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 PPP1R7Q15435 360 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 KYNUQ16719 465 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms