RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 C3orf62Q6ZUJ4 267 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 RAB11FIP2Q7L804 512 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 OTOAQ7RTW8 1153 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 STRA8Q7Z7C7 330 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 GALNT7Q86SF2 657 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 TRIM73Q86UV7 250 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 CEP97Q8IW35 865 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 PALM2Q8IXS6 379 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 RBM12BQ8IXT5 1001 aaKnown RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 LMNTD2Q8IXW0 634 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 BMPERQ8N8U9 685 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 GPATCH11Q8N954 259 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 OR5K2Q8NHB8 316 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 WDR48Q8TAF3 677 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 DENND1AQ8TEH3 1009 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 FBF1Q8TES7 1133 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 ASZ1Q8WWH4 475 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 KCNJ9Q92806 393 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 AHCYL2Q96HN2 611 aaKnown RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 TMEM74Q96NL1 305 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 MAP3K3Q99759 626 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 PHACTR1Q9C0D0 580 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 NRSN2Q9GZP1 204 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 KLHL25Q9H0H3 589 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 EPB41L4BQ9H329 900 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 CDC42EP4Q9H3Q1 356 aaKnown RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 TFB2MQ9H5Q4 396 aaKnown RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 STN1Q9H668 368 aaKnown RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 MVB12BQ9H7P6 319 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 ANKZF1Q9H8Y5 726 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 CAB39LQ9H9S4 337 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 APMAPQ9HDC9 416 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 FAM114A2Q9NRY5 505 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 HRASLS2Q9NWW9 162 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 SIDT1Q9NXL6 827 aaKnown RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 FOXJ2Q9P0K8 574 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 PISDQ9UG56 409 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 ADAMTS6Q9UKP5 1117 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 NFU1Q9UMS0 254 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 LHX6Q9UPM6 363 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 TDRKHQ9Y2W6 561 aaKnown RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 MTO1Q9Y2Z2 717 aaKnown RBP6.78□□□□□ -1.32
SMG6-209ENST00000571442 ITPR1Q14643 2758 aa6.78□□□□□ -1.32
SMG6-209ENST00000571442 SMG1Q96Q15 3661 aaKnown RBP6.77□□□□□ -1.33
SMG6-209ENST00000571442 URB1O60287 2271 aaKnown RBP6.77□□□□□ -1.33
SMG6-209ENST00000571442 FAM95CA0A1B0GW59 222 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 A0A1W2PPV9 198 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 HMX2A2RU54 273 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 EFCAB7A8K855 629 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 CDRT15L2A8MXV6 281 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 C9orf172C9J069 976 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 E5RI56 91 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 H3BMM5 538 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 NDC80O14777 642 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 PLD2O14939 933 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 HCRTR1O43613 425 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 NRP2O60462 931 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 PSIP1O75475 530 aaKnown RBP6.77□□□□□ -1.33
SMG6-209ENST00000571442 TNFSF15O95150 251 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 CTSBP07858 339 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 PSMB5P28074 263 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 NDUFS1P28331 727 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 PKLRP30613 574 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 PPM1FP49593 454 aaPredicted RBP6.77□□□□□ -1.33
SMG6-209ENST00000571442 TAS2R39P59534 338 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 SRSF6Q13247 344 aaKnown RBP6.77□□□□□ -1.33
SMG6-209ENST00000571442 KRT33BQ14525 404 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 TMED2Q15363 201 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 ZIC1Q15915 447 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 ZXDCQ2QGD7 858 aaPredicted RBP6.77□□□□□ -1.33
SMG6-209ENST00000571442 UNC5DQ6UXZ4 953 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 MBOAT1Q6ZNC8 495 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 KIAA0408Q6ZU52 694 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 TAX1BP1Q86VP1 789 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 AMIGO1Q86WK6 493 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 RELL1Q8IUW5 271 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 TBC1D21Q8IYX1 336 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 FBXO39Q8N4B4 442 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 PPM1NQ8N819 430 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 AVL9Q8NBF6 648 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 WDR36Q8NI36 951 aaKnown RBP6.77□□□□□ -1.33
SMG6-209ENST00000571442 UHMK1Q8TAS1 419 aaKnown RBP6.77□□□□□ -1.33
SMG6-209ENST00000571442 EEF1AKMT1Q8WVE0 214 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 ANKRD49Q8WVL7 239 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 ZFPM2Q8WW38 1151 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 LCN9Q8WX39 176 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 INPP5DQ92835 1189 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 VPS39Q96JC1 886 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 ELMO2Q96JJ3 720 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 SLC46A1Q96NT5 459 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 OR2A14Q96R47 310 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 FMO2Q99518 471 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 CTRCQ99895 268 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 TSSK1BQ9BXA7 367 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 TXLNGYQ9BZA5 131 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 UNKQ9C0B0 810 aaKnown RBP6.77□□□□□ -1.33
SMG6-209ENST00000571442 RAB33BQ9H082 229 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 TRIT1Q9H3H1 467 aaKnown RBP6.77□□□□□ -1.33
SMG6-209ENST00000571442 SRMSQ9H3Y6 488 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms