RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 BEND7Q8N7W2 519 aaPredicted RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 TAS1R2Q8TE23 839 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 SLC13A3Q8WWT9 602 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 AKAP1Q92667 903 aaKnown RBP eCLIP6.54□□□□□ -1.36
SMG1-217ENST00000569764 PSD2Q9BQI7 771 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 KLC2Q9H0B6 622 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 EPHX3Q9H6B9 360 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 UCK1Q9HA47 277 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 ADAMTS6Q9UKP5 1117 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 FAM189A1O60320 539 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 CLDN11O75508 207 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 LDOC1O95751 146 aaPredicted RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 PDGFBP01127 241 aaPredicted RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 PIGRP01833 764 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 ITGALP20701 1170 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 HNRNPA2B1P22626 353 aaKnown RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 TNFSF9P41273 254 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 SERPINB9P50453 376 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 NKX2-5P52952 324 aaPredicted RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 TSPAN5P62079 268 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 GPC5P78333 572 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 TAF10Q12962 218 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 PWP1Q13610 501 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 ADGRE1Q14246 886 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 GAS6Q14393 721 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 KCNT1Q5JUK3 1230 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 AFTPHQ6ULP2 937 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 MSANTD1Q6ZTZ1 278 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 TRILQ7L0X0 811 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 PXKQ7Z7A4 578 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 PLCZ1Q86YW0 608 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 CCDC36Q8IYA8 594 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 PHTF2Q8N3S3 785 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 FSTL5Q8N475 847 aaPredicted RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 ARFGAP2Q8N6H7 521 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 RCBTB1Q8NDN9 531 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 CREB3L4Q8TEY5 395 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 NSMCE2Q96MF7 247 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 LGMNQ99538 433 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 MINDY3Q9H8M7 445 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 ZNF395Q9H8N7 513 aaPredicted RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 RAB20Q9NX57 234 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 CD300AQ9UGN4 299 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 LRRC42Q9Y546 428 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 GPR45Q9Y5Y3 372 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 A0A1W2PQH9 124 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 MTMR11A4FU01 709 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 LOC730098B7Z3J9 87 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 NPIPA7E9PJI5 369 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 WRBO00258 174 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 BTN3A1O00481 513 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 LIN7AO14910 233 aaPredicted RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 PSMD3O43242 534 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 SUSD5O60279 629 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 HSF2BPO75031 334 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 SMNDC1O75940 238 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMG1-217ENST00000569764 IL1BP01584 269 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 ERBB2P04626 1255 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 NPIPA8P0DM63 369 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 KRT3P12035 628 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 COL6A2P12110 1019 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 HTR7P34969 479 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 MPLP40238 635 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 RPS3AP61247 264 aaKnown RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 USP46P62068 366 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 PLOD1Q02809 727 aaPredicted RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 ILF3Q12906 894 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMG1-217ENST00000569764 TFDP2Q14188 446 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 NOMO1Q15155 1222 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 NAB2Q15742 525 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 CLLU1OSQ5K130 101 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 CYB5R2Q6BCY4 276 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 WDR5BQ86VZ2 330 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 LRRC57Q8N9N7 239 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 EIF1ADQ8N9N8 165 aaKnown RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 TMEM174Q8WUU8 243 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 TM9SF4Q92544 642 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 ZNF707Q96C28 371 aaPredicted RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 C19orf60Q96EN9 201 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 QRSL1Q9H0R6 528 aaKnown RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 RNF39Q9H2S5 420 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 METTL7AQ9H8H3 244 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 CHRAC1Q9NRG0 131 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 MRPL15Q9P015 296 aaKnown RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 ABI3Q9P2A4 366 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 PCDHA9Q9Y5H5 950 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 A0A075B6Q4 140 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 NEDD8-MDP1E9PL57 170 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 KCNN4O15554 427 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 ATMINO43313 823 aaPredicted RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 ADRA1DP25100 572 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 LCN1P31025 176 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 TIE1P35590 1138 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 IGFALSP35858 605 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 CLCNKAP51800 687 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 RAC3P60763 192 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 C2CD6Q53TS8 623 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 AARS2Q5JTZ9 985 aaKnown RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 KCTD16Q68DU8 428 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms