RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 IQCKQ8N0W5 287 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 SFRP1Q8N474 314 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 ACVR1CQ8NER5 493 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 GPR156Q8NFN8 814 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 SPDYE1Q8NFV5 336 aaPredicted RBP15.63■□□□□ 0.09
USB1-215ENST00000569252 BAHD1Q8TBE0 780 aaPredicted RBP15.63■□□□□ 0.09
USB1-215ENST00000569252 EPS8L3Q8TE67 593 aaKnown RBP15.63■□□□□ 0.09
USB1-215ENST00000569252 SLC37A2Q8TED4 501 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 NAT6Q93015 286 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 HIST1H2AHQ96KK5 128 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 SLC30A3Q99726 388 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 HIST1H2AJQ99878 128 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 H2AFJQ9BTM1 129 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 TMEM109Q9BVC6 243 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 SNX15Q9NRS6 342 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 LRIT1Q9P2V4 623 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 TDRKHQ9Y2W6 561 aaKnown RBP15.63■□□□□ 0.09
USB1-215ENST00000569252 MED16Q9Y2X0 877 aa15.63■□□□□ 0.09
USB1-215ENST00000569252 CPED1A4D0V7 1026 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 TRABD2BA6NFA1 517 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 PRR19A6NJB7 356 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 RGS16O15492 202 aaPredicted RBP15.62■□□□□ 0.09
USB1-215ENST00000569252 PHGDHO43175 533 aaKnown RBP15.62■□□□□ 0.09
USB1-215ENST00000569252 NUDT21O43809 227 aaKnown RBP15.62■□□□□ 0.09
USB1-215ENST00000569252 EML2O95834 649 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 C2P06681 752 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 C8GP07360 202 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 BRAFP15056 766 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 H2AFXP16104 143 aaPredicted RBP15.62■□□□□ 0.09
USB1-215ENST00000569252 CKMT2P17540 419 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 CYP2A7P20853 494 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 GCAP28676 217 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 SLC19A1P41440 591 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 ATP6V0D1P61421 351 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 TIAL1Q01085 375 aaKnown RBP eCLIP15.62■□□□□ 0.09
USB1-215ENST00000569252 ZNF460Q14592 562 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 CASP8Q14790 479 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 PLCL1Q15111 1095 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 TIFABQ6ZNK6 161 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 CMC1Q7Z7K0 106 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 VRK3Q8IV63 474 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 SLC35F3Q8IY50 421 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 GOLGA6L1Q8N7Z2 621 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 KYQ8NBH2 561 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 PHC3Q8NDX5 983 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 MCOLN3Q8TDD5 553 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 PDLIM5Q96HC4 596 aaKnown RBP15.62■□□□□ 0.09
USB1-215ENST00000569252 AHCYL2Q96HN2 611 aaKnown RBP15.62■□□□□ 0.09
USB1-215ENST00000569252 RMDN2Q96LZ7 410 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 ZIM3Q96PE6 472 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 STMN4Q9H169 189 aaPredicted RBP15.62■□□□□ 0.09
USB1-215ENST00000569252 ACBD3Q9H3P7 528 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 NMRAL1Q9HBL8 299 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 SCHIP1Q9P0W5 487 aaPredicted RBP15.62■□□□□ 0.09
USB1-215ENST00000569252 CTNNAL1Q9UBT7 734 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 LNPEPQ9UIQ6 1025 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 CDYLQ9Y232 598 aa15.62■□□□□ 0.09
USB1-215ENST00000569252 APOBEC2Q9Y235 224 aaKnown RBP15.62■□□□□ 0.09
USB1-215ENST00000569252 TP53BP1Q12888 1972 aaPredicted RBP15.62■□□□□ 0.09
USB1-215ENST00000569252 A6NCN8 305 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 SLC16A5O15375 505 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 TNFSF14O43557 240 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 NOBOXO60393 691 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 LTA4HP09960 611 aaKnown RBP15.61■□□□□ 0.09
USB1-215ENST00000569252 GIMD1P0DJR0 217 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 CKMT1AP12532 417 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 ZNF37AP17032 561 aaPredicted RBP15.61■□□□□ 0.09
USB1-215ENST00000569252 ACADLP28330 430 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 FASLGP48023 281 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 KPNA2P52292 529 aaKnown RBP15.61■□□□□ 0.09
USB1-215ENST00000569252 MAZP56270 477 aaKnown RBP15.61■□□□□ 0.09
USB1-215ENST00000569252 GBX1Q14549 363 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 ZKSCAN8Q15776 578 aaPredicted RBP15.61■□□□□ 0.09
USB1-215ENST00000569252 FBXO38Q6PIJ6 1188 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 FRA10AC1Q70Z53 315 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 UBE2R2Q712K3 238 aaPredicted RBP15.61■□□□□ 0.09
USB1-215ENST00000569252 OR5K2Q8NHB8 316 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 GIMAP7Q8NHV1 300 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 ACMSDQ8TDX5 336 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 PATE1Q8WXA2 126 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 ANKRD7Q92527 254 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 RAD51AP1Q96B01 352 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 PKNOX2Q96KN3 472 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 DCBLD2Q96PD2 775 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 DERL2Q9GZP9 239 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 ABCG4Q9H172 646 aa15.61■□□□□ 0.09
USB1-215ENST00000569252 ZNF624Q9P2J8 865 aaPredicted RBP15.61■□□□□ 0.09
USB1-215ENST00000569252 RUVBL2Q9Y230 463 aaKnown RBP15.61■□□□□ 0.09
USB1-215ENST00000569252 HMX2A2RU54 273 aa15.6■□□□□ 0.09
USB1-215ENST00000569252 MATN4O95460 622 aa15.6■□□□□ 0.09
USB1-215ENST00000569252 SYF2O95926 243 aaKnown RBP15.6■□□□□ 0.09
USB1-215ENST00000569252 COL6A2P12110 1019 aa15.6■□□□□ 0.09
USB1-215ENST00000569252 PNLIPP16233 465 aa15.6■□□□□ 0.09
USB1-215ENST00000569252 AMD1P17707 334 aa15.6■□□□□ 0.09
USB1-215ENST00000569252 ALDH4A1P30038 563 aa15.6■□□□□ 0.09
USB1-215ENST00000569252 GPR3P46089 330 aa15.6■□□□□ 0.09
USB1-215ENST00000569252 CCT5P48643 541 aa15.6■□□□□ 0.09
USB1-215ENST00000569252 PRKG2Q13237 762 aa15.6■□□□□ 0.09
USB1-215ENST00000569252 CSHL1Q14406 222 aa15.6■□□□□ 0.09
USB1-215ENST00000569252 PROX2Q3B8N5 592 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms