RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 CASC4Q6P4E1 433 aa19.5■□□□□ 0.71
ABCA3-206ENST00000569062 FAM199XQ6PEV8 388 aaPredicted RBP19.5■□□□□ 0.71
ABCA3-206ENST00000569062 SPESP1Q6UW49 350 aa19.5■□□□□ 0.71
ABCA3-206ENST00000569062 TMEM126BQ8IUX1 230 aa19.5■□□□□ 0.71
ABCA3-206ENST00000569062 CFAP61Q8NHU2 1237 aa19.5■□□□□ 0.71
ABCA3-206ENST00000569062 IL1RAPL1Q9NZN1 696 aa19.5■□□□□ 0.71
ABCA3-206ENST00000569062 GNPTGQ9UJJ9 305 aa19.5■□□□□ 0.71
ABCA3-206ENST00000569062 COL6A6A6NMZ7 2263 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 KATNA1O75449 491 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 APOA4P06727 396 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 CHRM5P08912 532 aaPredicted RBP19.49■□□□□ 0.71
ABCA3-206ENST00000569062 UGT2B7P16662 529 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 TCN2P20062 427 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 RPS3P23396 243 aaKnown RBP eCLIP19.49■□□□□ 0.71
ABCA3-206ENST00000569062 DNAJC21Q5F1R6 531 aaKnown RBP19.49■□□□□ 0.71
ABCA3-206ENST00000569062 CTSL3PQ5NE16 218 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 KIAA0930Q6ICG6 404 aaPredicted RBP19.49■□□□□ 0.71
ABCA3-206ENST00000569062 BORAQ6PGQ7 559 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 TRIM73Q86UV7 250 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 SLC38A9Q8NBW4 561 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 FLVCR1-AS1Q8TAF5 88 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 CT55Q8WUE5 264 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 SERPINB12Q96P63 405 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 PANX3Q96QZ0 392 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 OR2A14Q96R47 310 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 RUFY1Q96T51 708 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 CIDEBQ9UHD4 219 aa19.49■□□□□ 0.71
ABCA3-206ENST00000569062 BAHCC1Q9P281 2608 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 CES2O00748 559 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 CPNE3O75131 537 aaKnown RBP19.48■□□□□ 0.71
ABCA3-206ENST00000569062 SLCO2B1O94956 709 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 MLNP12872 115 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 PEBP1P30086 187 aaKnown RBP19.48■□□□□ 0.71
ABCA3-206ENST00000569062 FMO4P31512 558 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 FNTAP49354 379 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 TYSND1Q2T9J0 566 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 MRNIPQ6NTE8 343 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 CDHR3Q6ZTQ4 885 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 SDCCAG8Q86SQ7 713 aaPredicted RBP19.48■□□□□ 0.71
ABCA3-206ENST00000569062 LRRC6Q86X45 466 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 NAT8LQ8N9F0 302 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 LMNTD1Q8N9Z9 388 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 MCUQ8NE86 351 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 OR8K5Q8NH50 307 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 OR1L3Q8NH93 324 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 LPGAT1Q92604 370 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 PDLIM2Q96JY6 352 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 BIRC8Q96P09 236 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 CATSPER2Q96P56 530 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 MENTQ9BUN1 341 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 TWSG1Q9GZX9 223 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 FANCEQ9HB96 536 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 OR6C2Q9NZP2 312 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 SAMD15Q9P1V8 674 aa19.48■□□□□ 0.71
ABCA3-206ENST00000569062 GOLGA6L10A0A0M3HER8 536 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 SDR42E2A6NKP2 422 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 TMEM150CB9EJG8 249 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 MC1RQ01726 317 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 GPS2Q13227 327 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 DNASE1L3Q13609 305 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 DHX34Q14147 1143 aaKnown RBP19.47■□□□□ 0.71
ABCA3-206ENST00000569062 ERV3-1Q14264 604 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 GRB7Q14451 532 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 TMED2Q15363 201 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 KYNUQ16719 465 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 ZNF789Q5FWF6 425 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 ZNF605Q86T29 641 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 AGGF1Q8N302 714 aaeCLIP19.47■□□□□ 0.71
ABCA3-206ENST00000569062 GRK7Q8WTQ7 553 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 ZNF669Q96BR6 464 aaPredicted RBP19.47■□□□□ 0.71
ABCA3-206ENST00000569062 XAB2Q9HCS7 855 aaKnown RBP19.47■□□□□ 0.71
ABCA3-206ENST00000569062 FAM60AQ9NP50 221 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 LATS2Q9NRM7 1088 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 KCND3Q9UK17 655 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 CRYL1Q9Y2S2 319 aa19.47■□□□□ 0.71
ABCA3-206ENST00000569062 GCN1Q92616 2671 aaKnown RBP19.47■□□□□ 0.71
ABCA3-206ENST00000569062 FAM237BA0A1B0GVD1 139 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 ISM1B1AKI9 464 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 B8ZZF3 427 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 NIPSNAP2O75323 286 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 F7P08709 466 aaPredicted RBP19.46■□□□□ 0.71
ABCA3-206ENST00000569062 FURINP09958 794 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 MSL3P1P0C860 447 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 PAMP19021 973 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 PKLRP30613 574 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 MAGEA3P43357 314 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 POLE2P56282 527 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 NFATC3Q12968 1075 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 ZIC1Q15915 447 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 DEFB109BQ30KR1 87 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 ANKRD20A4Q4UJ75 823 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 CRTC2Q53ET0 693 aaPredicted RBP19.46■□□□□ 0.71
ABCA3-206ENST00000569062 ARMC3Q5W041 872 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 UNC5DQ6UXZ4 953 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 CENPUQ71F23 418 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 OTOAQ7RTW8 1153 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 HOOK3Q86VS8 718 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 DCUN1D3Q8IWE4 304 aa19.46■□□□□ 0.71
ABCA3-206ENST00000569062 C19orf47Q8N9M1 422 aaKnown RBP19.46■□□□□ 0.71
ABCA3-206ENST00000569062 LINC01555Q8NAE3 123 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms