RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 LRFN5Q96NI6 719 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 FNBP1Q96RU3 617 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 MXRA8Q9BRK3 442 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 APOL6Q9BWW8 343 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 MTIF3Q9H2K0 278 aaKnown RBP3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 ST6GALNAC4Q9H4F1 302 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 UBE2ZQ9H832 354 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 VCPKMTQ9H867 229 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 KAT14Q9H8E8 782 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 POLR1BQ9H9Y6 1135 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 TRPV4Q9HBA0 871 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 C20orf141Q9NUB4 165 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 CISD1Q9NZ45 108 aaKnown RBP3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 EHD2Q9NZN4 543 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 MPP6Q9NZW5 540 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 WDR35Q9P2L0 1181 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 MUTYHQ9UIF7 546 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 MKLN1Q9UL63 735 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 NFE2L3Q9Y4A8 694 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 ELP1O95163 1332 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 PDS5AQ29RF7 1337 aaKnown RBP3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 MROH7Q68CQ1 1323 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 RALGAPA2Q2PPJ7 1873 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 KIAA1217Q5T5P2 1943 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 MICAL3Q7RTP6 2002 aa3.32□□□□□ -1.88
HMGB1P6-201ENST00000569046 ZNF532Q9HCE3 1301 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 TEX13CA0A0J9YWL9 993 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 A0A1W2PQF6 199 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 hDV102S1A0JD36 115 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 EME2A4GXA9 379 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 URADA6NGE7 173 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 RTCAO00442 366 aaKnown RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 WDR46O15213 610 aaKnown RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 LINC01565O15544 149 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 ZIC3O60481 467 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 HNRNPCL1O60812 293 aaKnown RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 SURF6O75683 361 aaKnown RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 GGPS1O95749 300 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 SLC25A27O95847 323 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 PTMAP06454 111 aaKnown RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 IQCF3P0C7M6 154 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 IGHV4-30-4P0DP06 118 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 ETFAP13804 333 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 SELLP14151 372 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 COX7A2P14406 83 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 CDH2P19022 906 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 ATP5DP30049 168 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 ARL1P40616 181 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 NRIP1P48552 1158 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 CDH8P55286 799 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 EIF3BP55884 814 aaKnown RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 OLR1P78380 273 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 GABPAQ06546 454 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 DLG1Q12959 904 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 CRYMQ14894 314 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 PCLAFQ15004 111 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 SF3B4Q15427 424 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 KIF19Q2TAC6 998 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 ZNF805Q5CZA5 627 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 TCP11X2Q5H9J9 407 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 PAPPA-AS1Q5QFB9 102 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 HIST2H2BCQ6DN03 193 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 HIST2H2BDQ6DRA6 164 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 ANKRD54Q6NXT1 300 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 CDC73Q6P1J9 531 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 TMEM179Q6ZVK1 233 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 GLRX5Q86SX6 157 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 TLK2Q86UE8 772 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 EPHX4Q8IUS5 362 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 FBXO16Q8IX29 292 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 CCDC170Q8IYT3 715 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 NUP93Q8N1F7 819 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 POC5Q8NA72 575 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 POGLUT1Q8NBL1 392 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 CADM4Q8NFZ8 388 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 FRAT1Q92837 279 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 GCNAQ96QF7 691 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 CSF3RQ99062 836 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 RIOK1Q9BRS2 568 aaKnown RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 HGH1Q9BTY7 390 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 XPO4Q9C0E2 1151 aaKnown RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 UPF3AQ9H1J1 476 aaKnown RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 OPA3Q9H6K4 179 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 DDX31Q9H8H2 851 aaKnown RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 ZNF556Q9HAH1 456 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 IL1RAPL2Q9NP60 686 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 NOX4Q9NPH5 578 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 SLC9A2Q9UBY0 812 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 CLIP2Q9UDT6 1046 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 RASAL2Q9UJF2 1139 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 DBNLQ9UJU6 430 aaKnown RBP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 CCL27Q9Y4X3 112 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 CAPN7Q9Y6W3 813 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 USP34Q70CQ2 3546 aa3.31□□□□□ -1.88
HMGB1P6-201ENST00000569046 TTC28Q96AY4 2481 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 IGLV5-37A0A075B6J1 123 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 A8MZ25 164 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 F5H6K3 240 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 WNT9BO14905 357 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms