RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 TMEM47Q9BQJ4 181 aa8.01□□□□□ -1.13
NIFKP4-201ENST00000567275 KIF9Q9HAQ2 790 aa8.01□□□□□ -1.13
NIFKP4-201ENST00000567275 INTS6Q9UL03 887 aaKnown RBP8.01□□□□□ -1.13
NIFKP4-201ENST00000567275 PSAT1Q9Y617 370 aa8.01□□□□□ -1.13
NIFKP4-201ENST00000567275 KDM3AQ9Y4C1 1321 aa8.01□□□□□ -1.13
NIFKP4-201ENST00000567275 AP3D1O14617 1153 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 NMT2O60551 498 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 CXCL10P02778 98 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 CA3P07451 260 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 LAMP2P13473 410 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 CASTP20810 708 aaKnown RBP8□□□□□ -1.13
NIFKP4-201ENST00000567275 DCTN2Q13561 401 aaKnown RBP8□□□□□ -1.13
NIFKP4-201ENST00000567275 CUL4AQ13619 759 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 ALG11Q2TAA5 492 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 USP41Q3LFD5 358 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 CFAP58Q5T655 872 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 ETNPPLQ8TBG4 499 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 UBE2Q2Q8WVN8 375 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 ITPAQ9BY32 194 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 FTOQ9C0B1 505 aaKnown RBP eCLIP8□□□□□ -1.13
NIFKP4-201ENST00000567275 KCNN2Q9H2S1 579 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 EVA1AQ9H8M9 152 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 UBTD1Q9HAC8 227 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 PCDH9Q9HC56 1237 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 NKIRAS2Q9NYR9 191 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 MKLN1Q9UL63 735 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 ABCB11O95342 1321 aa8□□□□□ -1.13
NIFKP4-201ENST00000567275 TRANK1O15050 2925 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 MLYCDO95822 493 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 GH1P01241 217 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 KRT10P13645 584 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 MYOGP15173 224 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 CALML3P27482 149 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 BDKRB2P30411 391 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 KRT20P35900 424 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 BRWD1-AS2P59051 145 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 RPS3AP61247 264 aaKnown RBP7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 ZBTB17Q13105 803 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 PTGISQ16647 500 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 MFSD6Q6ZSS7 791 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 DEFB128Q7Z7B8 93 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 LSMEM1Q8N8F7 131 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 SPATA22Q8NHS9 363 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 DNASE2BQ8WZ79 361 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 ESR2Q92731 530 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 FAM122AQ96E09 287 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 KRTAP2-2Q9BYT5 123 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 EBF2Q9HAK2 575 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 DONSONQ9NYP3 566 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 CAPN7Q9Y6W3 813 aa7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 PRRC2BQ5JSZ5 2229 aaKnown RBP7.99□□□□□ -1.13
NIFKP4-201ENST00000567275 LCTP09848 1927 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 GOLGA6L9A6NEM1 432 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 HSPD1P10809 573 aaKnown RBP7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 AMD1P17707 334 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 HNRNPH2P55795 449 aaKnown RBP7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 DLX5P56178 289 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 SNAP25P60880 206 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 POU5F1Q01860 360 aaKnown RBP7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 ZRSR1Q15695 479 aaKnown RBP7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 STXBP2Q15833 593 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 ASPRV1Q53RT3 343 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 TSSK4Q6SA08 328 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 PQLC2Q6ZP29 291 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 Q6ZTC4 211 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 IQCA1Q86XH1 822 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 CHERPQ8IWX8 916 aaKnown RBP7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 CCDC13Q8IYE1 715 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 PPTC7Q8NI37 304 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 PSPC1Q8WXF1 523 aaKnown RBP7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 CD101Q93033 1021 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 SMARCE1Q969G3 411 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 INPP4AQ96PE3 977 aaPredicted RBP7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 RAD9AQ99638 391 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 PIP5K1AQ99755 562 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 MMP25Q9NPA2 562 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 SEPT11Q9NVA2 429 aaKnown RBP7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 CTNNA3Q9UI47 895 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 MRPL11Q9Y3B7 192 aaKnown RBP7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 CCDC171Q6TFL3 1326 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 TANC1Q9C0D5 1861 aa7.98□□□□□ -1.13
NIFKP4-201ENST00000567275 HAS3O00219 553 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 PLOD3O60568 738 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 SEC14L2O76054 403 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 GJB5O95377 273 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 FTCDO95954 541 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 DGKAP23743 735 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 ARHGAP1Q07960 439 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 TROAPQ12815 778 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 CDC37Q16543 378 aaPredicted RBP7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 RILPL1Q5EBL4 403 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 TMEM31Q5JXX7 168 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 MFSD4BQ5TF39 518 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 SIGIRRQ6IA17 410 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 ARNTL2Q8WYA1 636 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 FEM1CQ96JP0 617 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 TGS1Q96RS0 853 aaKnown RBP7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 SYNCQ9H7C4 482 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 LOXL2Q9Y4K0 774 aa7.97□□□□□ -1.13
NIFKP4-201ENST00000567275 DDX49Q9Y6V7 483 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms