RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 MEI1Q5TIA1 1274 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 TXNRD3NBQ6F5E7 133 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 SCYL2Q6P3W7 929 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 PAMR1Q6UXH9 720 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 ARCQ7LC44 396 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 NIPA2Q8N8Q9 360 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 ARMC2Q8NEN0 867 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 OR1L3Q8NH93 324 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 CCDC110Q8TBZ0 833 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 KRT35Q92764 455 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 SCRN2Q96FV2 425 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 PEBP4Q96S96 227 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 RIOK2Q9BVS4 552 aaKnown RBP9.37□□□□□ -0.91
CAPN3-216ENST00000567071 NOL6Q9H6R4 1146 aaKnown RBP9.37□□□□□ -0.91
CAPN3-216ENST00000567071 CATSPERBQ9H7T0 1116 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 ZWILCHQ9H900 591 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 HRASLS2Q9NWW9 162 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 PCSK1NQ9UHG2 260 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 LCMT1Q9UIC8 334 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 DNAJC16Q9Y2G8 782 aa9.37□□□□□ -0.91
CAPN3-216ENST00000567071 NKX2-6A6NCS4 301 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 OR5K3A6NET4 321 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 WASH4PA8MWX3 477 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 FAM72CH0Y354 149 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 J3KR12 359 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 PRPSAP2O60256 369 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 PRAMEF11O60813 436 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 CRLF1O75462 422 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 USP1O94782 785 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 KLHL18O94889 574 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 ZRANB2O95218 330 aaKnown RBP eCLIP9.36□□□□□ -0.91
CAPN3-216ENST00000567071 ZNF30P17039 623 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 VCLP18206 1134 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 CDH3P22223 829 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 RPL10P27635 214 aaKnown RBP9.36□□□□□ -0.91
CAPN3-216ENST00000567071 CHRNB4P30926 498 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 CTNNA1P35221 906 aaKnown RBP9.36□□□□□ -0.91
CAPN3-216ENST00000567071 SLC1A1P43005 524 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 NKX6-1P78426 367 aaPredicted RBP9.36□□□□□ -0.91
CAPN3-216ENST00000567071 SLC25A11Q02978 314 aaKnown RBP9.36□□□□□ -0.91
CAPN3-216ENST00000567071 CACNG1Q06432 222 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 PLA2G4EQ3MJ16 856 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 ZFYVE27Q5T4F4 411 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 FAM72AQ5TYM5 149 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 FAM72DQ6L9T8 149 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 ABRAXAS1Q6UWZ7 409 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 CHSY3Q70JA7 882 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 TSPAN33Q86UF1 283 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 FAM72BQ86X60 149 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 CCDC185Q8N715 623 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 LILRB4Q8NHJ6 448 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 PROKR1Q8TCW9 393 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 ZFPM2Q8WW38 1151 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 CENPIQ92674 756 aaPredicted RBP9.36□□□□□ -0.91
CAPN3-216ENST00000567071 HAS2Q92819 552 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 GPR137Q96N19 417 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 PDFQ9HBH1 243 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 RRAGDQ9NQL2 400 aaPredicted RBP9.36□□□□□ -0.91
CAPN3-216ENST00000567071 C1GALT1Q9NS00 363 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 TXLNGQ9NUQ3 528 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 NEU3Q9UQ49 428 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 JRKLQ9Y4A0 524 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 AP1M2Q9Y6Q5 423 aa9.36□□□□□ -0.91
CAPN3-216ENST00000567071 HRNRQ86YZ3 2850 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-216ENST00000567071 PKD1L1Q8TDX9 2849 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 ARHGAP42A6NI28 874 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 GPR89AB7ZAQ6 455 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 H7C1Q1 480 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 KMOO15229 486 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 DDX3YO15523 660 aaKnown RBP9.35□□□□□ -0.91
CAPN3-216ENST00000567071 PSTPIP1O43586 416 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 KRT1P04264 644 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 UMODP07911 640 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 MSL3P1P0C860 447 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 GPR89BP0CG08 455 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 ZNF7P17097 686 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-216ENST00000567071 CTNNA2P26232 953 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 IL1R2P27930 398 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 CXCR5P32302 372 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 RUNX1T1Q06455 604 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 PRKAA1Q13131 559 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 RFTN1Q14699 578 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-216ENST00000567071 RBBP7Q16576 425 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 HADHQ16836 314 aaKnown RBP9.35□□□□□ -0.91
CAPN3-216ENST00000567071 ATP13A4Q4VNC1 1196 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 AGAP9Q5VTM2 703 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 C1orf189Q5VU69 101 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 FBXW10Q5XX13 1052 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 ZNF385CQ66K41 422 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-216ENST00000567071 LRRC66Q68CR7 880 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 TMEM211Q6ICI0 200 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 CRTC3Q6UUV7 619 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 WASH2PQ6VEQ5 465 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 C3P1Q6ZMU1 363 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 STRADAQ7RTN6 431 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 UMODL1-AS1Q8N2C9 162 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 UBL4BQ8N7F7 174 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 KIF18AQ8NI77 898 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 HSPH1Q92598 858 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 ALG3Q92685 438 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms