RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 ACSL1P33121 698 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 UGT1A3P35503 534 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC15A1P46059 708 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 KHKP50053 298 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 TAS2R43P59537 309 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 GPX6P59796 221 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC25A11Q02978 314 aaKnown RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 ZNF33BQ06732 778 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 SP140Q13342 867 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 KLF1Q13351 362 aaPredicted RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 TRAM1Q15629 374 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 TIGD6Q17RP2 521 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 SNAP47Q5SQN1 464 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 LDLRAP1Q5SW96 308 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 MSANTD2Q6P1R3 559 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 BORAQ6PGQ7 559 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 PAOXQ6QHF9 649 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 RPTNQ6XPR3 784 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 ZNF730Q6ZMV8 503 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 DEF8Q6ZN54 512 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 ASRGL1Q7L266 308 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 SNX20Q7Z614 316 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 ZC3HC1Q86WB0 502 aaKnown RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 RAVER1Q8IY67 606 aaKnown RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 RHEBL1Q8TAI7 183 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 OR8D1Q8WZ84 308 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 TFAP2BQ92481 460 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 HTRA1Q92743 480 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 EFHD2Q96C19 240 aaPredicted RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 TBATAQ96M53 351 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 RIPOR3Q96MK2 946 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 TSSK3Q96PN8 268 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 MNTQ99583 582 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 DERL2Q9GZP9 239 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 TLE6Q9H808 572 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 UGT1A7Q9HAW7 530 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 UGT1A10Q9HAW8 530 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 UGT1A8Q9HAW9 530 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 XPNPEP1Q9NQW7 623 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 TMPRSS4Q9NRS4 437 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 TLR6Q9Y2C9 796 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 SH3PXD2BA1X283 911 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 LCHNA4D1U4 455 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 B4GALT5O43286 388 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 AP2A2O94973 939 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 POP4O95707 220 aaKnown RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 EOMESO95936 686 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 C9P02748 559 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 PRNPP04156 253 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 HLA-DPB1P04440 258 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 LAMP2P13473 410 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 VARSP26640 1264 aaKnown RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 NMBRP28336 390 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 CTNNB1P35222 781 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 RPL4P36578 427 aaKnown RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 BUD31P41223 144 aaPredicted RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 RFX3P48380 749 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 TPTEP56180 551 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 SMAD3P84022 425 aaKnown RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 PUDPQ08623 228 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 LSAMPQ13449 338 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 CBX2Q14781 532 aaPredicted RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 TAF13Q15543 124 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 NPTX1Q15818 432 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 KCNA10Q16322 511 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 ZNF630Q2M218 657 aaPredicted RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC9B1Q4ZJI4 515 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 ESRP1Q6NXG1 681 aaKnown RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 BAIAP2L2Q6UXY1 529 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 MSANTD1Q6ZTZ1 278 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 USP30Q70CQ3 517 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 VN1R5Q7Z5H4 357 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 EFCAB3Q8N7B9 438 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 OR10A6Q8NH74 314 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 HASPINQ8TF76 798 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 STON2Q8WXE9 905 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 CLEC4DQ8WXI8 215 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 RAD51AP1Q96B01 352 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 MTFMTQ96DP5 389 aaKnown RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 SCGB3A2Q96PL1 93 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 TSGA13Q96PP4 275 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 EBF4Q9BQW3 602 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 MND1Q9BWT6 205 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 DCSTAMPQ9H295 470 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 RC3H2Q9HBD1 1191 aaKnown RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 IL23AQ9NPF7 189 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 FARSBQ9NSD9 589 aaKnown RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 CCM2LQ9NUG4 571 aaPredicted RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 GDAP2Q9NXN4 497 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 SPATA7Q9P0W8 599 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 MRPS7Q9Y2R9 242 aaKnown RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 A8MT66 165 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 ENTPD6O75354 484 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 ARL6IP5O75915 188 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 VNN1O95497 513 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 GOT2P00505 430 aaKnown RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 EBLN1P0CF75 366 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 XRCC1P18887 633 aaPredicted RBP4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 HTR1EP28566 365 aa4.27□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC1A2P43004 574 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms