RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 THP07101 528 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 CD36P16671 472 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 EFNA1P20827 205 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-215ENST00000566843 VAC14Q08AM6 782 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 DGCR6Q14129 220 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 MAPKAPK3Q16644 382 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 ZNF404Q494X3 552 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 KDM4DQ6B0I6 523 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 CES5AQ6NT32 575 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 GLB1L3Q8NCI6 653 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-215ENST00000566843 IPCEF1Q8WWN9 437 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-215ENST00000566843 SLC38A4Q969I6 547 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 TBCDQ9BTW9 1192 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 POLR1EQ9GZS1 481 aaKnown RBP15.37■□□□□ 0.05
COMMD4-215ENST00000566843 DCSTAMPQ9H295 470 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 NUDT4Q9NZJ9 180 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 NLRC5Q86WI3 1866 aa15.37■□□□□ 0.05
COMMD4-215ENST00000566843 ILVBLA1L0T0 632 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 OR7A17O14581 309 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 SERPINA1P01009 418 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 PIRTP0C851 137 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 ODC1P11926 461 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 PKMP14618 531 aaKnown RBP15.36■□□□□ 0.05
COMMD4-215ENST00000566843 SPNP16150 400 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 RPL9P32969 192 aaKnown RBP15.36■□□□□ 0.05
COMMD4-215ENST00000566843 DAPP51397 102 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 MAD2L1BPQ15013 274 aaPredicted RBP15.36■□□□□ 0.05
COMMD4-215ENST00000566843 PTPRNQ16849 979 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 AGMOQ6ZNB7 445 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 LRRTM3Q86VH5 581 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 POC5Q8NA72 575 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 NETO1Q8TDF5 533 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 TRIB3Q96RU7 358 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 ZIC5Q96T25 663 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 GAD1Q99259 594 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 PARK7Q99497 189 aaKnown RBP15.36■□□□□ 0.05
COMMD4-215ENST00000566843 APOL4Q9BPW4 351 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 PARVBQ9HBI1 364 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 AASSQ9UDR5 926 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 NUDT5Q9UKK9 219 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 NDRG4Q9ULP0 352 aaKnown RBP15.36■□□□□ 0.05
COMMD4-215ENST00000566843 TLR6Q9Y2C9 796 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 MUSKO15146 869 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 IL6P05231 212 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 TGFBR1P36897 503 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 AFF1P51825 1210 aaKnown RBP15.36■□□□□ 0.05
COMMD4-215ENST00000566843 SIM2Q14190 667 aaPredicted RBP15.36■□□□□ 0.05
COMMD4-215ENST00000566843 ABRAXAS2Q15018 415 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 CARD16Q5EG05 197 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 MS4A13Q5J8X5 152 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 COLEC12Q5KU26 742 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 PNCKQ6P2M8 343 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 GALNT5Q7Z7M9 940 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 CARNMT1Q8N4J0 409 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 SIDT2Q8NBJ9 832 aaKnown RBP15.36■□□□□ 0.05
COMMD4-215ENST00000566843 ZNF540Q8NDQ6 660 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 OR4F6Q8NGB9 312 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 CD200R1Q8TD46 325 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 EEF1AKMT1Q8WVE0 214 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 LINGO1Q96FE5 620 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 TP63Q9H3D4 680 aaPredicted RBP15.36■□□□□ 0.05
COMMD4-215ENST00000566843 RIBC2Q9H4K1 309 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 C1orf109Q9NX04 203 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 TRMT6Q9UJA5 497 aaKnown RBP15.36■□□□□ 0.05
COMMD4-215ENST00000566843 GMPPBQ9Y5P6 360 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 U3KQV3 271 aa15.36■□□□□ 0.05
COMMD4-215ENST00000566843 ZBBXA8MT70 800 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 E9PQ18 207 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 SLC10A3P09131 477 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 PAX3P23760 479 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 NR4A2P43354 598 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 IL2P60568 153 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 SERINC3Q13530 473 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 FAM174BQ3ZCQ3 159 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 MFSD4BQ5TF39 518 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 RNF165Q6ZSG1 346 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 GOLGA7Q7Z5G4 137 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 SNX20Q7Z614 316 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 METTL23Q86XA0 190 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 DNAJB8Q8NHS0 232 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 CAPSLQ8WWF8 208 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 NCLNQ969V3 563 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 PYCR2Q96C36 320 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 BARD1Q99728 777 aaKnown RBP15.35■□□□□ 0.05
COMMD4-215ENST00000566843 CPPED1Q9BRF8 314 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-215ENST00000566843 RHNO1Q9BSD3 238 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 CPA4Q9UI42 421 aa15.35■□□□□ 0.05
COMMD4-215ENST00000566843 PNMA8BQ9ULN7 279 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-215ENST00000566843 EIF3LQ9Y262 564 aaKnown RBP15.35■□□□□ 0.05
COMMD4-215ENST00000566843 A0A1W2PQH9 124 aa15.34■□□□□ 0.05
COMMD4-215ENST00000566843 TREHO43280 583 aa15.34■□□□□ 0.05
COMMD4-215ENST00000566843 TBX1O43435 398 aa15.34■□□□□ 0.05
COMMD4-215ENST00000566843 FAM20BO75063 409 aa15.34■□□□□ 0.05
COMMD4-215ENST00000566843 DLGAP3O95886 979 aa15.34■□□□□ 0.05
COMMD4-215ENST00000566843 SLC2A4P14672 509 aa15.34■□□□□ 0.05
COMMD4-215ENST00000566843 TRAF3Q13114 568 aa15.34■□□□□ 0.05
COMMD4-215ENST00000566843 MAD2L1Q13257 205 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-215ENST00000566843 UPP1Q16831 310 aa15.34■□□□□ 0.05
COMMD4-215ENST00000566843 CTSL3PQ5NE16 218 aa15.34■□□□□ 0.05
COMMD4-215ENST00000566843 ALG1LQ6GMV1 187 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms