RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ENTPD1P49961 510 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 CYP4F3Q08477 520 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 SKIV2LQ15477 1246 aaKnown RBP16.41■□□□□ 0.22
CMTM3-213ENST00000566756 CDKL4Q5MAI5 379 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 OTUD3Q5T2D3 398 aaPredicted RBP16.41■□□□□ 0.22
CMTM3-213ENST00000566756 CACHD1Q5VU97 1274 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 TXNDC8Q6A555 127 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 Q6ZNX1 250 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 SNX20Q7Z614 316 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 C8orf59Q8N0T1 100 aaPredicted RBP16.41■□□□□ 0.22
CMTM3-213ENST00000566756 CLEC4FQ8N1N0 589 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 DCBLD1Q8N8Z6 715 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 C17orf80Q9BSJ5 609 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 OSBPL10Q9BXB5 764 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 SLC29A3Q9BZD2 475 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 CD244Q9BZW8 370 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 CIPCQ9C0C6 399 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 VAPAQ9P0L0 249 aa16.41■□□□□ 0.22
CMTM3-213ENST00000566756 ZNF106Q9H2Y7 1883 aaKnown RBP16.41■□□□□ 0.22
CMTM3-213ENST00000566756 IQCF5A8MTL0 148 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 HIDE1A8MVS5 230 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 RSL1D1O76021 490 aaKnown RBP16.4■□□□□ 0.22
CMTM3-213ENST00000566756 PGLSO95336 258 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 SLC2A4P14672 509 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 SYN1P17600 705 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 NFKBIAP25963 317 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 GSTM2P28161 218 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 GNPDA1P46926 289 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 NRIP1P48552 1158 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 HNRNPFP52597 415 aaKnown RBP16.4■□□□□ 0.22
CMTM3-213ENST00000566756 DGKQP52824 942 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 TOP3AQ13472 1001 aaPredicted RBP16.4■□□□□ 0.22
CMTM3-213ENST00000566756 MAPKAPK3Q16644 382 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 ARMC12Q5T9G4 340 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 ATG9BQ674R7 924 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 ELMSAN1Q6PJG2 1045 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 STK32CQ86UX6 486 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 SERPINA9Q86WD7 417 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 FAM9CQ8IZT9 166 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 RNF217Q8TC41 542 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 MIPOL1Q8TD10 442 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 RBM4BQ9BQ04 359 aaKnown RBP16.4■□□□□ 0.22
CMTM3-213ENST00000566756 HTATIP2Q9BUP3 242 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 RBM4Q9BWF3 364 aaKnown RBP16.4■□□□□ 0.22
CMTM3-213ENST00000566756 ING2Q9H160 280 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 CLMPQ9H6B4 373 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 GPN2Q9H9Y4 310 aaPredicted RBP16.4■□□□□ 0.22
CMTM3-213ENST00000566756 LATS2Q9NRM7 1088 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 KLHL42Q9P2K6 505 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 DNMT3BQ9UBC3 853 aaKnown RBP16.4■□□□□ 0.22
CMTM3-213ENST00000566756 OPTCQ9UBM4 332 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 BLOC1S6Q9UL45 172 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 ZNF510Q9Y2H8 683 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 PCDHB9Q9Y5E1 797 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 ELOVL7A1L3X0 281 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 GSTA4O15217 222 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 DFNA5O60443 496 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 MT-ND1P03886 318 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 INHBBP09529 407 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 CRHBPP24387 322 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 EPHA5P54756 1037 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 RHOAP61586 193 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 RPL38P63173 70 aaKnown RBP16.4■□□□□ 0.22
CMTM3-213ENST00000566756 PPP2R2BQ00005 443 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 PLCL1Q15111 1095 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 RUNDC3AQ59EK9 446 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 PLPP4Q5VZY2 271 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 MACC1Q6ZN28 852 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 TMEM26Q6ZUK4 368 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 HS6ST3Q8IZP7 471 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 TBC1D15Q8TC07 691 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 RAB2BQ8WUD1 216 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 SLC22A17Q8WUG5 538 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 USP7Q93009 1102 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 EID2BQ96D98 161 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 MYO19Q96H55 970 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 DPY30Q9C005 99 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 PIF1Q9H611 641 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 NSUN3Q9H649 340 aaKnown RBP16.4■□□□□ 0.22
CMTM3-213ENST00000566756 TBC1D23Q9NUY8 699 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 FAIMQ9NVQ4 179 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 ELOVL2Q9NXB9 296 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 ANGPTL3Q9Y5C1 460 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 HEMK1Q9Y5R4 338 aaPredicted RBP16.4■□□□□ 0.22
CMTM3-213ENST00000566756 CPQQ9Y646 472 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 DOCK6Q96HP0 2047 aa16.4■□□□□ 0.22
CMTM3-213ENST00000566756 TRBV5-3A0A0A0MS03 114 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.39■□□□□ 0.21
CMTM3-213ENST00000566756 FAM220BPB1ANY3 271 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 K7EPI3 171 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 GAPDHSO14556 408 aaPredicted RBP16.39■□□□□ 0.21
CMTM3-213ENST00000566756 ERN1O75460 977 aaKnown RBP16.39■□□□□ 0.21
CMTM3-213ENST00000566756 FGF19O95750 216 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 CCNA2P20248 432 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 ITGALP20701 1170 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 HSPA7P48741 367 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 ZXDBP98169 803 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 MOGQ16653 247 aa16.39■□□□□ 0.21
CMTM3-213ENST00000566756 HABP4Q5JVS0 413 aaKnown RBP16.39■□□□□ 0.21
CMTM3-213ENST00000566756 HTR3DQ70Z44 454 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms