RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 MCM3P25205 808 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 GP5P40197 560 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 GFERP55789 205 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 GABREP78334 506 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 TIAL1Q01085 375 aaKnown RBP eCLIP25.37■■□□□ 1.65
NME3-209ENST00000566600 CPNE9Q8IYJ1 553 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 FBXO39Q8N4B4 442 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 RAB42Q8N4Z0 105 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 RCBTB1Q8NDN9 531 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 VPS39Q96JC1 886 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 ELMO2Q96JJ3 720 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 CYTH2Q99418 400 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 MCMBPQ9BTE3 642 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 RAB11FIP5Q9BXF6 653 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 CDC42EP4Q9H3Q1 356 aaKnown RBP25.37■■□□□ 1.65
NME3-209ENST00000566600 OR6C2Q9NZP2 312 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 KLHL3Q9UH77 587 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 ICKQ9UPZ9 632 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 LOXL2Q9Y4K0 774 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 NFS1Q9Y697 457 aa25.37■■□□□ 1.65
NME3-209ENST00000566600 FAM95CA0A1B0GW59 222 aa25.36■■□□□ 1.65
NME3-209ENST00000566600 CATP04040 527 aaKnown RBP25.36■■□□□ 1.65
NME3-209ENST00000566600 MLLT3P42568 568 aaPredicted RBP25.36■■□□□ 1.65
NME3-209ENST00000566600 C16orf72Q14CZ0 275 aa25.36■■□□□ 1.65
NME3-209ENST00000566600 GRTP1Q5TC63 336 aa25.36■■□□□ 1.65
NME3-209ENST00000566600 UNQ6494/PRO21346Q6UXR6 183 aa25.36■■□□□ 1.65
NME3-209ENST00000566600 PRSS42Q7Z5A4 293 aa25.36■■□□□ 1.65
NME3-209ENST00000566600 CARFQ8N187 725 aa25.36■■□□□ 1.65
NME3-209ENST00000566600 PPM1NQ8N819 430 aa25.36■■□□□ 1.65
NME3-209ENST00000566600 RBBP8Q99708 897 aa25.36■■□□□ 1.65
NME3-209ENST00000566600 TSR3Q9UJK0 312 aaKnown RBP25.36■■□□□ 1.65
NME3-209ENST00000566600 A8MU76 341 aa25.35■■□□□ 1.65
NME3-209ENST00000566600 PSIP1O75475 530 aaKnown RBP25.35■■□□□ 1.65
NME3-209ENST00000566600 RASSF9O75901 435 aa25.35■■□□□ 1.65
NME3-209ENST00000566600 PIAS1O75925 651 aa25.35■■□□□ 1.65
NME3-209ENST00000566600 MPOP05164 745 aa25.35■■□□□ 1.65
NME3-209ENST00000566600 JMJD7P0C870 316 aa25.35■■□□□ 1.65
NME3-209ENST00000566600 POLR2CP19387 275 aaPredicted RBP25.35■■□□□ 1.65
NME3-209ENST00000566600 SPRP35270 261 aaPredicted RBP25.35■■□□□ 1.65
NME3-209ENST00000566600 RAB28P51157 221 aa25.35■■□□□ 1.65
NME3-209ENST00000566600 IL2P60568 153 aa25.35■■□□□ 1.65
NME3-209ENST00000566600 PAQR3Q6TCH7 311 aa25.35■■□□□ 1.65
NME3-209ENST00000566600 IGF2-ASQ6U949 168 aa25.35■■□□□ 1.65
NME3-209ENST00000566600 UBXN4Q92575 508 aa25.35■■□□□ 1.65
NME3-209ENST00000566600 TMEM121BQ9BXQ6 578 aaPredicted RBP25.35■■□□□ 1.65
NME3-209ENST00000566600 FUT8Q9BYC5 575 aa25.35■■□□□ 1.65
NME3-209ENST00000566600 XKR8Q9H6D3 395 aa25.35■■□□□ 1.65
NME3-209ENST00000566600 SLC39A10Q9ULF5 831 aa25.35■■□□□ 1.65
NME3-209ENST00000566600 RUVBL2Q9Y230 463 aaKnown RBP25.35■■□□□ 1.65
NME3-209ENST00000566600 TLCD2A6NGC4 264 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 C2orf74A8MZ97 194 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 BTN3A3O00478 584 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 TPBGLP0DKB5 382 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 RBMS1P29558 406 aaKnown RBP25.34■■□□□ 1.65
NME3-209ENST00000566600 SLC12A2P55011 1212 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 POU4F1Q01851 419 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 CACHD1Q5VU97 1274 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 FOXR1Q6PIV2 292 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 FAM92BQ6ZTR7 304 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 ADGRF3Q8IZF5 1079 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 MYO1HQ8N1T3 1032 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 EEF1AKMT1Q8WVE0 214 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 ASB11Q8WXH4 323 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.34■■□□□ 1.653e-6■■■■□ 24.4
NME3-209ENST00000566600 TSPAN17Q96FV3 270 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 OLFM1Q99784 485 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 ACSS3Q9H6R3 686 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 POPDC3Q9HBV1 291 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 DKK4Q9UBT3 224 aa25.34■■□□□ 1.65
NME3-209ENST00000566600 GSAPA4D1B5 854 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 TMEM8BA6NDV4 472 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 BTN3A1O00481 513 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 RASGRF2O14827 1237 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 DXOO77932 396 aaKnown RBP25.33■■□□□ 1.65
NME3-209ENST00000566600 ACSL3O95573 720 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 SAT1P21673 171 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 MAP4P27816 1152 aaKnown RBP25.33■■□□□ 1.65
NME3-209ENST00000566600 TNFRSF8P28908 595 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 PKLRP30613 574 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 BDKRB1P46663 353 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 GRB7Q14451 532 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 CYHR1Q6ZMK1 362 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 TRMT10CQ7L0Y3 403 aaKnown RBP25.33■■□□□ 1.65
NME3-209ENST00000566600 FBXO15Q8NCQ5 510 aaPredicted RBP25.33■■□□□ 1.65
NME3-209ENST00000566600 ZNF768Q9H5H4 540 aaKnown RBP25.33■■□□□ 1.65
NME3-209ENST00000566600 CCDC86Q9H6F5 360 aaKnown RBP25.33■■□□□ 1.65
NME3-209ENST00000566600 SYTL2Q9HCH5 934 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 SEMA5BQ9P283 1151 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 LNPEPQ9UIQ6 1025 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 POMT2Q9UKY4 750 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 PLAGL1Q9UM63 463 aa25.33■■□□□ 1.65
NME3-209ENST00000566600 A0A1W2PNU3 283 aaPredicted RBP25.32■■□□□ 1.64
NME3-209ENST00000566600 PIPSLA2A3N6 862 aa25.32■■□□□ 1.64
NME3-209ENST00000566600 GFYI3L273 518 aa25.32■■□□□ 1.64
NME3-209ENST00000566600 ZBTB14O43829 449 aa25.32■■□□□ 1.64
NME3-209ENST00000566600 CHRM5P08912 532 aaPredicted RBP25.32■■□□□ 1.64
NME3-209ENST00000566600 PPP1CAP62136 330 aa25.32■■□□□ 1.64
NME3-209ENST00000566600 PIWIL4Q7Z3Z4 852 aaKnown RBP25.32■■□□□ 1.64
NME3-209ENST00000566600 KMT5CQ86Y97 462 aa25.32■■□□□ 1.64
NME3-209ENST00000566600 OR2L8Q8NGY9 312 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms