RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 TFAP2BQ92481 460 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 MCEEQ96PE7 176 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 RPF1Q9H9Y2 349 aaKnown RBP10.45□□□□□ -0.74
UBFD1-205ENST00000566136 CISHQ9NSE2 258 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 MRPS2Q9Y399 296 aaKnown RBP10.45□□□□□ -0.74
UBFD1-205ENST00000566136 ZNF236Q9UL36 1845 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 FRMPD3Q5JV73 1810 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 RGS16O15492 202 aaPredicted RBP10.45□□□□□ -0.74
UBFD1-205ENST00000566136 TULP3O75386 442 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 FUCA1P04066 466 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 TMEM191BP0C7N4 346 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 ITIH1P19827 911 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 MGAT1P26572 445 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 CTBSQ01459 385 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 GAD2Q05329 585 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 DNAJC3Q13217 504 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 ZNF568Q3ZCX4 644 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 RAET1GQ6H3X3 334 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 CDC73Q6P1J9 531 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 BRAT1Q6PJG6 821 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 ADCK2Q7Z695 626 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.45□□□□□ -0.74
UBFD1-205ENST00000566136 PQLC1Q8N2U9 271 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 KDM8Q8N371 416 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 Q8NA96 180 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 NUDCD1Q96RS6 583 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 TDRD1Q9BXT4 1180 aaKnown RBP10.45□□□□□ -0.74
UBFD1-205ENST00000566136 CDC42EP4Q9H3Q1 356 aaKnown RBP10.45□□□□□ -0.74
UBFD1-205ENST00000566136 SOX17Q9H6I2 414 aaPredicted RBP10.45□□□□□ -0.74
UBFD1-205ENST00000566136 MINDY3Q9H8M7 445 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 ALKBH4Q9NXW9 302 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 NXF1Q9UBU9 619 aaKnown RBP10.45□□□□□ -0.74
UBFD1-205ENST00000566136 RNF24Q9Y225 148 aa10.45□□□□□ -0.74
UBFD1-205ENST00000566136 GMNCA6NCL1 334 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 BTBD17A6NE02 478 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 FAM90A8PA6NJQ4 464 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 F8VP50 259 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 GRM6O15303 877 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 PSTPIP1O43586 416 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 NRP2O60462 931 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 KRT19P08727 400 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 FAM90A13PP0C7W8 464 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 FAM90A24PP0C7X0 464 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 CXCL8P10145 99 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 MMP8P22894 467 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 HTR7P34969 479 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 ADCY8P40145 1251 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 PCP4P48539 62 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 OGDHQ02218 1023 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 LCP2Q13094 533 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 DUOXA2Q1HG44 320 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 ZNF699Q32M78 642 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 NRN1LQ496H8 165 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 NADK2Q4G0N4 442 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 PRAMEF20Q5VT98 475 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 TXNRD3NBQ6F5E7 133 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 OR2T3Q8NH03 318 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 CFAP61Q8NHU2 1237 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 TCP11Q8WWU5 503 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 DVL3Q92997 716 aaPredicted RBP10.44□□□□□ -0.74
UBFD1-205ENST00000566136 SNF8Q96H20 258 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 ASPNQ9BXN1 380 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 PLK3Q9H4B4 646 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 PARVAQ9NVD7 372 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 CTNNAL1Q9UBT7 734 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 NPIPB13A6NJU9 1138 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 NPIPB4C9JG80 1138 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 PIK3R2O00459 728 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 DYNC1LI2O43237 492 aaPredicted RBP10.44□□□□□ -0.74
UBFD1-205ENST00000566136 TRAPPC3O43617 180 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 CTAG2O75638 210 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 SPDEFO95238 335 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 FAM107AO95990 144 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 GAS8O95995 478 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 ATF2P15336 505 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 IVDP26440 423 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 SDHAP31040 664 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 PER3P56645 1201 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 TGM3Q08188 693 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 ATF7IP2Q5U623 682 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 HIST2H2BCQ6DN03 193 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 HIST2H2BDQ6DRA6 164 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 EFCAB12Q6NXP0 572 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 DNAJC24Q6P3W2 148 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 ZNF813Q6ZN06 617 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 SPATA21Q7Z572 469 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 KATNAL2Q8IYT4 538 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 TOP6BLQ8N6T0 577 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 GPR156Q8NFN8 814 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 SLCO2A1Q92959 643 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 HAUS1Q96CS2 278 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 PLEKHG4BQ96PX9 1271 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 ASCL2Q99929 193 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 TPPP3Q9BW30 176 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 CARD8Q9Y2G2 431 aa10.44□□□□□ -0.74
UBFD1-205ENST00000566136 IGKV6-21A0A0C4DH24 114 aa10.43□□□□□ -0.74
UBFD1-205ENST00000566136 TERTO14746 1132 aaKnown RBP10.43□□□□□ -0.74
UBFD1-205ENST00000566136 IQCF3P0C7M6 154 aa10.43□□□□□ -0.74
UBFD1-205ENST00000566136 HGFP14210 728 aa10.43□□□□□ -0.74
UBFD1-205ENST00000566136 MMP9P14780 707 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms