RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 NRLP54845 237 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CASP9P55211 416 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 FCGRTP55899 365 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NCS1P62166 190 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ASAH1Q13510 395 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PPP1R3AQ16821 1122 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PTPRNQ16849 979 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TUSC1Q2TAM9 212 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PPM1JQ5JR12 505 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PM20D1Q6GTS8 502 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 POMZP3Q6PJE2 187 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 DOK6Q6PKX4 331 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ERO1BQ86YB8 467 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NLGN4YQ8NFZ3 816 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 RSC1A1Q92681 617 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 GPR137Q96N19 417 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 RDH12Q96NR8 316 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 GPR78Q96P69 363 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TTLL2Q9BWV7 592 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ACE2Q9BYF1 805 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 IL22Q9GZX6 179 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ABCB9Q9NP78 766 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 EXTL2Q9UBQ6 330 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 SCN11AQ9UI33 1791 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PHLPP1O60346 1717 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 POLRMTO00411 1230 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 AGXTP21549 392 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MAPK3P27361 379 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 FKBP1AP62942 108 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 LTB4RQ15722 352 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CLLU1Q5K131 121 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 LAIR1Q6GTX8 287 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CYHR1Q6ZMK1 362 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MRPL10Q7Z7H8 261 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 RAB43Q86YS6 212 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 HDDC3Q8N4P3 179 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PLD5Q8N7P1 536 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PCSK9Q8NBP7 692 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 CHURC1Q8WUH1 139 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CPB2Q96IY4 423 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TEPSINQ96N21 525 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MCCC2Q9HCC0 563 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TMEM8AQ9HCN3 771 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 POLR3BQ9NW08 1133 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 USP36Q9P275 1121 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 ABCD2Q9UBJ2 740 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 SLC45A1Q9Y2W3 748 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 FAM170BA6NMN3 283 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TARM1B6A8C7 271 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CHRM3P20309 590 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 GPX3P22352 226 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 OXTRP30559 389 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 GDI1P31150 447 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 HTR7P34969 479 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MRPL19P49406 292 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 CSTF3Q12996 717 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 TIGD6Q17RP2 521 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CACHD1Q5VU97 1274 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 KIAA0319Q5VV43 1072 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 LRRC70Q7Z2Q7 622 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TMC8Q8IU68 726 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CLEC4FQ8N1N0 589 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TMEM145Q8NBT3 493 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 B3GALNT2Q8NCR0 500 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CCNYQ8ND76 341 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 JOSD2Q8TAC2 188 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 C7orf34Q96L11 122 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CGRRF1Q99675 332 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 KCTD14Q9BQ13 255 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 TREX2Q9BQ50 279 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 OSBPL2Q9H1P3 480 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 IGSF5Q9NSI5 407 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MALT1Q9UDY8 824 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NDUFAF1Q9Y375 327 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 RGPD8O14715 1765 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 PRORSD1PA6NEY8 169 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 LOC110117498-PIK3R3F6TDL0 507 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SEC14L5O43304 696 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 GCNT3O95395 438 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 METTL18O95568 372 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CD4P01730 458 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 RPL9P32969 192 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 SCNN1AP37088 669 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 MTHFRP42898 656 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TFAMQ00059 246 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 UBXN2BQ14CS0 331 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 AGKQ53H12 422 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PYCR3Q53H96 274 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ASPRV1Q53RT3 343 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZBTB37Q5TC79 503 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SLC25A24Q6NUK1 477 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CORO6Q6QEF8 472 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 NRARPQ7Z6K4 114 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 BBS1Q8NFJ9 593 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 OR7A2PQ8NGA2 310 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PIK3R3Q92569 461 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZNF577Q9BSK1 485 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CINPQ9BW66 212 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 TRIM36Q9NQ86 728 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CREBZFQ9NS37 354 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms