RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 BTBD10Q9BSF8 475 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 HDAC8Q9BY41 377 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 FAM126AQ9BYI3 521 aaPredicted RBP6.08□□□□□ -1.44
CHD9-217ENST00000565832 ATG10Q9H0Y0 220 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 LRMDAQ9H2I8 198 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 AKTIPQ9H8T0 292 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 IPPKQ9H8X2 491 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 FZD3Q9NPG1 666 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 TXLNGQ9NUQ3 528 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 C2orf42Q9NWW7 574 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 FBXL12Q9NXK8 326 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 ARL15Q9NXU5 204 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 KCTD5Q9NXV2 234 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 LMCD1Q9NZU5 365 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 ZNHIT2Q9UHR6 403 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 PACSIN3Q9UKS6 424 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 ZFR2Q9UPR6 939 aaKnown RBP6.08□□□□□ -1.44
CHD9-217ENST00000565832 PCM1Q15154 2024 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 C1QTNF3-AMACRE9PGA6 284 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 H0Y858 1186 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 GIPC1O14908 333 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 AZIN1O14977 448 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 RAD51BO15315 384 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 GYG2O15488 501 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 LATO43561 262 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 MAGEC1O60732 1142 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 PCCBP05166 539 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 FGF4P08620 206 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 AOC1P19801 751 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 CD33P20138 364 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 CALB2P22676 271 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 PTPN4P29074 926 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 NTSR1P30989 418 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 TNFRSF4P43489 277 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 RPS14P62263 151 aaKnown RBP6.08□□□□□ -1.44
CHD9-217ENST00000565832 SPEM2Q0P670 501 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 ELP6Q0PNE2 266 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 LCP2Q13094 533 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 KLF10Q13118 480 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 LRIT3Q3SXY7 679 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 LARP4Q71RC2 724 aaKnown RBP eCLIP6.08□□□□□ -1.44
CHD9-217ENST00000565832 GOLGA7Q7Z5G4 137 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 ADAMTSL2Q86TH1 951 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 TRAPPC5Q8IUR0 188 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 CLYBLQ8N0X4 340 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 OR13H1Q8NG92 308 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 OR9I1Q8NGQ6 314 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 OR2T11Q8NH01 316 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 CXorf40AQ8TE69 158 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 ZNF483Q8TF39 744 aaPredicted RBP6.08□□□□□ -1.44
CHD9-217ENST00000565832 TWIST2Q8WVJ9 160 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 PMEPA1Q969W9 287 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 GTPBP3Q969Y2 492 aaKnown RBP6.08□□□□□ -1.44
CHD9-217ENST00000565832 ULK4Q96C45 1275 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 MTFMTQ96DP5 389 aaKnown RBP6.08□□□□□ -1.44
CHD9-217ENST00000565832 ZNF837Q96EG3 531 aaPredicted RBP6.08□□□□□ -1.44
CHD9-217ENST00000565832 PPP1R16AQ96I34 528 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 MAELQ96JY0 434 aaKnown RBP6.08□□□□□ -1.44
CHD9-217ENST00000565832 PANX3Q96QZ0 392 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 SIKE1Q9BRV8 207 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 MEAF6Q9HAF1 191 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 FARSBQ9NSD9 589 aaKnown RBP6.08□□□□□ -1.44
CHD9-217ENST00000565832 KLC4Q9NSK0 619 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 SMOXQ9NWM0 555 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 SLC23A2Q9UGH3 650 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 TAGLN3Q9UI15 199 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.08□□□□□ -1.44
CHD9-217ENST00000565832 OARD1Q9Y530 152 aa6.08□□□□□ -1.44
CHD9-217ENST00000565832 COPG1Q9Y678 874 aaKnown RBP6.08□□□□□ -1.44
CHD9-217ENST00000565832 TBC1D3DA0A087WVF3 549 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TBC1D3IA0A087WXS9 549 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TBC1D3EA0A087X179 549 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TBC1D3KA0A087X1G2 549 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TBC1D3FA6NER0 549 aaPredicted RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 TBC1D3LB9A6J9 549 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 STX16-NPEPL1H3BU86 382 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 STX16O14662 325 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 FFAR3O14843 346 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 GPR42O15529 346 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 LILRB5O75023 590 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 PEX11AO75192 247 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 GPC4O75487 556 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 SLCO2B1O94956 709 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 ESRRBO95718 433 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 CAPN1P07384 714 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 ALDOCP09972 364 aaKnown RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 TBC1D3HP0C7X1 549 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 VCLP18206 1134 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 CPOXP36551 454 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 DIO3P55073 304 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 GALNT1Q10472 559 aaPredicted RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 GTF2H2Q13888 395 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 NFE2L1Q14494 772 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 GBX1Q14549 363 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 NAA25Q14CX7 972 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 CRY1Q16526 586 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TMEM52BQ4KMG9 183 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 SGO1Q5FBB7 561 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 LDLRAP1Q5SW96 308 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms