RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 OR6K6Q8NGW6 343 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 FCAMRQ8WWV6 532 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 RAD9AQ99638 391 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 SLA2Q9H6Q3 261 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 BIN3Q9NQY0 253 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 PCYT1BQ9Y5K3 369 aaPredicted RBP5.01□□□□□ -1.61
SMG1-211ENST00000565324 CIB4A0PJX0 185 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 OR2B3O76000 313 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 VARSP26640 1264 aaKnown RBP5.01□□□□□ -1.61
SMG1-211ENST00000565324 CDKN2CP42773 168 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 RAB5CP51148 216 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 PFKPQ01813 784 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 CDK18Q07002 472 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 SCGB2A2Q13296 93 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 SLC22A10Q63ZE4 541 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 HSDL2Q6YN16 418 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 OR2AJ1Q8NGZ0 328 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 EPYCQ99645 322 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 LHX5Q9H2C1 402 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 HCN2Q9UL51 889 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 NPHP4O75161 1426 aaPredicted RBP5.01□□□□□ -1.61
SMG1-211ENST00000565324 KIF1AQ12756 1690 aa5.01□□□□□ -1.61
SMG1-211ENST00000565324 SULT1B1O43704 296 aa5□□□□□ -1.61
SMG1-211ENST00000565324 ABCB7O75027 752 aa5□□□□□ -1.61
SMG1-211ENST00000565324 DNAJB6O75190 326 aa5□□□□□ -1.61
SMG1-211ENST00000565324 CAPN3P20807 821 aa5□□□□□ -1.61
SMG1-211ENST00000565324 HNRNPH3P31942 346 aaKnown RBP5□□□□□ -1.61
SMG1-211ENST00000565324 MSX2P35548 267 aaPredicted RBP5□□□□□ -1.61
SMG1-211ENST00000565324 TOB1P50616 345 aaPredicted RBP5□□□□□ -1.61
SMG1-211ENST00000565324 SEC23BQ15437 767 aa5□□□□□ -1.61
SMG1-211ENST00000565324 CELF1Q92879 486 aaKnown RBP5□□□□□ -1.61
SMG1-211ENST00000565324 COPS8Q99627 209 aa5□□□□□ -1.61
SMG1-211ENST00000565324 MRPL45Q9BRJ2 306 aaKnown RBP5□□□□□ -1.61
SMG1-211ENST00000565324 SNRNP25Q9BV90 132 aaKnown RBP5□□□□□ -1.61
SMG1-211ENST00000565324 POLR2J3Q9H1A7 115 aaKnown RBP5□□□□□ -1.61
SMG1-211ENST00000565324 CDT1Q9H211 546 aa5□□□□□ -1.61
SMG1-211ENST00000565324 HEBP2Q9Y5Z4 205 aa5□□□□□ -1.61
SMG1-211ENST00000565324 AIPO00170 330 aa5□□□□□ -1.61
SMG1-211ENST00000565324 NARSO43776 548 aaKnown RBP5□□□□□ -1.61
SMG1-211ENST00000565324 LYPLA1O75608 230 aaPredicted RBP5□□□□□ -1.61
SMG1-211ENST00000565324 SLC25A14O95258 325 aaPredicted RBP5□□□□□ -1.61
SMG1-211ENST00000565324 MT-ND2P03891 347 aa5□□□□□ -1.61
SMG1-211ENST00000565324 GTF2F2P13984 249 aa5□□□□□ -1.61
SMG1-211ENST00000565324 CYP3A5P20815 502 aa5□□□□□ -1.61
SMG1-211ENST00000565324 KELP23276 732 aa5□□□□□ -1.61
SMG1-211ENST00000565324 DNAJB1P25685 340 aa5□□□□□ -1.61
SMG1-211ENST00000565324 PTPRJQ12913 1337 aa5□□□□□ -1.61
SMG1-211ENST00000565324 OR2T5Q6IEZ7 315 aa5□□□□□ -1.61
SMG1-211ENST00000565324 DOK6Q6PKX4 331 aa5□□□□□ -1.61
SMG1-211ENST00000565324 TPGS1Q6ZTW0 290 aa5□□□□□ -1.61
SMG1-211ENST00000565324 UBE2R2Q712K3 238 aaPredicted RBP5□□□□□ -1.61
SMG1-211ENST00000565324 SLC9A9Q8IVB4 645 aa5□□□□□ -1.61
SMG1-211ENST00000565324 OR2T29Q8NH02 315 aa5□□□□□ -1.61
SMG1-211ENST00000565324 PLEKHO2Q8TD55 490 aa5□□□□□ -1.61
SMG1-211ENST00000565324 CLIP3Q96DZ5 547 aa5□□□□□ -1.61
SMG1-211ENST00000565324 ZNF514Q96K75 400 aaPredicted RBP5□□□□□ -1.61
SMG1-211ENST00000565324 KLHL15Q96M94 604 aa5□□□□□ -1.61
SMG1-211ENST00000565324 PHOX2BQ99453 314 aa5□□□□□ -1.61
SMG1-211ENST00000565324 RAB11FIP5Q9BXF6 653 aa5□□□□□ -1.61
SMG1-211ENST00000565324 SMURF1Q9HCE7 757 aa5□□□□□ -1.61
SMG1-211ENST00000565324 MEPEQ9NQ76 525 aaPredicted RBP5□□□□□ -1.61
SMG1-211ENST00000565324 PIH1D1Q9NWS0 290 aaKnown RBP5□□□□□ -1.61
SMG1-211ENST00000565324 MBD5Q9P267 1494 aa5□□□□□ -1.61
SMG1-211ENST00000565324 SPEF2Q9C093 1822 aa5□□□□□ -1.61
SMG1-211ENST00000565324 CPSF4LA6NMK7 179 aaKnown RBP5□□□□□ -1.61
SMG1-211ENST00000565324 VSTM5A8MXK1 200 aa5□□□□□ -1.61
SMG1-211ENST00000565324 KCNU1A8MYU2 1149 aa5□□□□□ -1.61
SMG1-211ENST00000565324 POLR1CO15160 346 aaPredicted RBP5□□□□□ -1.61
SMG1-211ENST00000565324 HK1P19367 917 aa5□□□□□ -1.61
SMG1-211ENST00000565324 OAZ1P54368 228 aa5□□□□□ -1.61
SMG1-211ENST00000565324 STON2Q8WXE9 905 aa5□□□□□ -1.61
SMG1-211ENST00000565324 UPF1Q92900 1129 aaKnown RBP eCLIP5□□□□□ -1.613e-7■■■□□ 14.7
SMG1-211ENST00000565324 PNPLA2Q96AD5 504 aa5□□□□□ -1.61
SMG1-211ENST00000565324 BTN2A3PQ96KV6 586 aa5□□□□□ -1.61
SMG1-211ENST00000565324 WACQ9BTA9 647 aa5□□□□□ -1.61
SMG1-211ENST00000565324 EIF5A2Q9GZV4 153 aaKnown RBP5□□□□□ -1.61
SMG1-211ENST00000565324 FANCFQ9NPI8 374 aa5□□□□□ -1.61
SMG1-211ENST00000565324 MKKSQ9NPJ1 570 aaPredicted RBP5□□□□□ -1.61
SMG1-211ENST00000565324 AGO1Q9UL18 857 aaKnown RBP5□□□□□ -1.61
SMG1-211ENST00000565324 TESMINQ9Y4I5 508 aa5□□□□□ -1.61
SMG1-211ENST00000565324 PRAMEF22A3QJZ6 481 aa5□□□□□ -1.61
SMG1-211ENST00000565324 TRIM64BA6NI03 449 aa5□□□□□ -1.61
SMG1-211ENST00000565324 H3BUI4 141 aa5□□□□□ -1.61
SMG1-211ENST00000565324 RPP40O75818 363 aaKnown RBP5□□□□□ -1.61
SMG1-211ENST00000565324 ATG12O94817 140 aa5□□□□□ -1.61
SMG1-211ENST00000565324 ADH1CP00326 375 aa5□□□□□ -1.61
SMG1-211ENST00000565324 ATP5A1P25705 553 aaKnown RBP5□□□□□ -1.61
SMG1-211ENST00000565324 HSD17B2P37059 387 aa5□□□□□ -1.61
SMG1-211ENST00000565324 RBMXP38159 391 aaKnown RBP5□□□□□ -1.61
SMG1-211ENST00000565324 CACNG1Q06432 222 aa5□□□□□ -1.61
SMG1-211ENST00000565324 FADDQ13158 208 aa5□□□□□ -1.61
SMG1-211ENST00000565324 SCARF1Q14162 830 aa5□□□□□ -1.61
SMG1-211ENST00000565324 NKX1-1Q15270 411 aaPredicted RBP5□□□□□ -1.61
SMG1-211ENST00000565324 BTBD16Q32M84 506 aa5□□□□□ -1.61
SMG1-211ENST00000565324 C10orf62Q5T681 223 aaPredicted RBP5□□□□□ -1.61
SMG1-211ENST00000565324 ADGRD1Q6QNK2 874 aa5□□□□□ -1.61
SMG1-211ENST00000565324 PLEKHH3Q7Z736 793 aa5□□□□□ -1.61
SMG1-211ENST00000565324 UBE2J2Q8N2K1 259 aa5□□□□□ -1.61
SMG1-211ENST00000565324 CLIP4Q8N3C7 705 aa5□□□□□ -1.61
SMG1-211ENST00000565324 SYNPOQ8N3V7 929 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms