RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SLC16A5O15375 505 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 BCAT2O15382 392 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-205ENST00000564899 DLX3O60479 287 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 SNX2O60749 519 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 S100BP04271 92 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-205ENST00000564899 ENO2P09104 434 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-205ENST00000564899 TPBGLP0DKB5 382 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 CD59P13987 128 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 GFAPP14136 432 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 CYP2A7P20853 494 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 BGNP21810 368 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 MAPK9P45984 424 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 HK3P52790 923 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 ABRQ12979 859 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 LRP8Q14114 963 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 PDK4Q16654 411 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 PPP1R3AQ16821 1122 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 METRNLQ641Q3 311 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 SBSNQ6UWP8 590 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 UBE2R2Q712K3 238 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-205ENST00000564899 RAB44Q7Z6P3 723 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-205ENST00000564899 TRIM42Q8IWZ5 723 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 CFAP61Q8NHU2 1237 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 C1orf216Q8TAB5 229 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 PPP1R14CQ8TAE6 165 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 LRRC8CQ8TDW0 803 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 ASB11Q8WXH4 323 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 SKA1Q96BD8 255 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 MAGEB18Q96M61 343 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 GTPBP2Q9BX10 602 aaKnown RBP10.82□□□□□ -0.68
SF3B3-205ENST00000564899 OR52A5Q9H2C5 316 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 OXSMQ9NWU1 459 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 UTP6Q9NYH9 597 aaKnown RBP10.82□□□□□ -0.68
SF3B3-205ENST00000564899 NUDT4Q9NZJ9 180 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 SIRPGQ9P1W8 387 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 ADAM21Q9UKJ8 722 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 ACSL5Q9ULC5 683 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 PNMA8BQ9ULN7 279 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-205ENST00000564899 TMCO1Q9UM00 188 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 OARD1Q9Y530 152 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 CEP192Q8TEP8 1941 aa10.82□□□□□ -0.68
SF3B3-205ENST00000564899 ZNF462Q96JM2 2506 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 NCF1BA6NI72 391 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-205ENST00000564899 PDZK1P1A8MUH7 402 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 NCF1CA8MVU1 366 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-205ENST00000564899 GFYI3L273 518 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 IFRD1O00458 451 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-205ENST00000564899 VILLO15195 856 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 PSIP1O75475 530 aaKnown RBP10.81□□□□□ -0.68
SF3B3-205ENST00000564899 MATN4O95460 622 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 CATP04040 527 aaKnown RBP10.81□□□□□ -0.68
SF3B3-205ENST00000564899 PRB1P04280 392 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 CFIP05156 583 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 SLC35G4P0C7Q5 338 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 FGF3P11487 239 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-205ENST00000564899 NCF1P14598 390 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-205ENST00000564899 GNSP15586 552 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 IDSP22304 550 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 MAP4P27816 1152 aaKnown RBP10.81□□□□□ -0.68
SF3B3-205ENST00000564899 ACTR1BP42025 376 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 BDKRB1P46663 353 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 BLKP51451 505 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 CLCNKAP51800 687 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 AFF3P51826 1226 aaKnown RBP10.81□□□□□ -0.68
SF3B3-205ENST00000564899 PRKAA2P54646 552 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 C21orf59P57076 290 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 NXPH1P58417 271 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 ACTR1AP61163 376 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 NFKB2Q00653 900 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 CTBSQ01459 385 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 ASPHQ12797 758 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 ILF3Q12906 894 aaKnown RBP eCLIP10.81□□□□□ -0.68
SF3B3-205ENST00000564899 TCEA2Q15560 299 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 TEAD4Q15561 434 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 TGFBIQ15582 683 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 CHI3L2Q15782 390 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 PHKG1Q16816 387 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 TUBB8Q3ZCM7 444 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 ZNF542PQ5EBM4 170 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 LIPMQ5VYY2 423 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 SLC23A3Q6PIS1 610 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 SPATS2Q86XZ4 545 aaKnown RBP10.81□□□□□ -0.68
SF3B3-205ENST00000564899 SYT12Q8IV01 421 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 SLC22A9Q8IVM8 553 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 PHACTR4Q8IZ21 702 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 FBXO39Q8N4B4 442 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 PTGR2Q8N8N7 351 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-205ENST00000564899 DLG3Q92796 817 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 CCDC126Q96EE4 140 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 PHF21BQ96EK2 531 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 RMDN2Q96LZ7 410 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 SLC12A9Q9BXP2 914 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 TRIM54Q9BYV2 358 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 WWP1Q9H0M0 922 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 TMEM168Q9H0V1 697 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 TCEAL2Q9H3H9 227 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-205ENST00000564899 CCDC134Q9H6E4 229 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 RDH14Q9HBH5 336 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 PARVBQ9HBI1 364 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 TRNAU1APQ9NX07 287 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms