RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ZNF451Q9Y4E5 1061 aa11.79□□□□□ -0.52
GTF3C1-204ENST00000564664 TCRBV7S2A1N4TA0A589 114 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 C9J4A7 227 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 BHMG1C9JSJ3 638 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 ZNF749O43361 778 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 CEACAM4O75871 244 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 CAPN1P07384 714 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 CHRM5P08912 532 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 PRSS56P0CW18 603 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 VARSP26640 1264 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 CCL11P51671 97 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 RRADP55042 308 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 RPS18P62269 152 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 SSPNQ14714 243 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 KIR2DS3Q14952 304 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 IGFBP7Q16270 282 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 SLC5A12Q1EHB4 618 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 SYTL3Q4VX76 610 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 FASTKD1Q53R41 847 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 DRICH1Q6PGQ1 229 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 CDHR3Q6ZTQ4 885 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 ENDOVQ8N8Q3 282 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 GLIS1Q8NBF1 620 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 OR5AR1Q8NGP9 310 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 PROKR1Q8TCW9 393 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 MIB2Q96AX9 1013 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 SLC22A18Q96BI1 424 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 RNF31Q96EP0 1072 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 OR2A14Q96R47 310 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 RUFY1Q96T51 708 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 HGH1Q9BTY7 390 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 XKR8Q9H6D3 395 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 CASS4Q9NQ75 786 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 ANAPC5Q9UJX4 755 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 ICKQ9UPZ9 632 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 DRG1Q9Y295 367 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 ZKSCAN5Q9Y2L8 839 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 MRFAP1Q9Y605 127 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 PRSS21Q9Y6M0 314 aa11.78□□□□□ -0.52
GTF3C1-204ENST00000564664 PTPN13Q12923 2485 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 A0A0J9YY10 115 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 CCDC78A2IDD5 438 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 CLEC18AA5D8T8 446 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 K7EM74 188 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 KPNA5O15131 536 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 OR2B3O76000 313 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 TMEM63AO94886 807 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 FKBP9O95302 570 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 GOT2P00505 430 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 IFNB1P01574 187 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 UGT2B7P16662 529 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 TTPAP49638 278 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 PRAMEP78395 509 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 IL10RAQ13651 578 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 NCF4Q15080 339 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 RPS6KA1Q15418 735 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 CCNG2Q16589 344 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 CCDC38Q502W7 563 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 PCID2Q5JVF3 399 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 PRAMEF17Q5VTA0 474 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 ARMC3Q5W041 872 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 LCN10Q6JVE6 187 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 RHBDD2Q6NTF9 364 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 CLEC18BQ6UXF7 455 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 RAB43Q86YS6 212 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 SLC22A15Q8IZD6 547 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 CCDC89Q8N998 374 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 C19orf47Q8N9M1 422 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 CLEC18CQ8NCF0 446 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 OR6P1Q8NGX9 317 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 MAIP1Q8WWC4 291 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 NACC2Q96BF6 587 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 DESI2Q9BSY9 194 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 AP1M1Q9BXS5 423 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 TRIM55Q9BYV6 548 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 RAB6BQ9NRW1 208 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 PIH1D1Q9NWS0 290 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 SRPK3Q9UPE1 567 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 PLCL2Q9UPR0 1127 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 TDRKHQ9Y2W6 561 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 TCAF1Q9Y4C2 921 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 CAPN6Q9Y6Q1 641 aa11.77□□□□□ -0.53
GTF3C1-204ENST00000564664 LRRK2Q5S007 2527 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 OR51F1A6NGY5 319 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 ARGFXA6NJG6 315 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 TTLL8A6PVC2 850 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 H3BMH7 237 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 OR1I1O60431 355 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 DPM1O60762 260 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 GPC4O75487 556 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 SLCO2B1O94956 709 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 APOA4P06727 396 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 PVRP15151 417 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 NR1D1P20393 614 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 NPY2RP49146 381 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 RAB28P51157 221 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 DCDP81605 110 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 KYNUQ16719 465 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 MEI1Q5TIA1 1274 aa11.76□□□□□ -0.53
GTF3C1-204ENST00000564664 ZNF385CQ66K41 422 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms