RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 VRK3Q8IV63 474 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 ADGRF3Q8IZF5 1079 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 LSM14AQ8ND56 463 aaKnown RBP17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 SLC39A7Q92504 469 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 RNF31Q96EP0 1072 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 STAMBPL1Q96FJ0 436 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 PPM1MQ96MI6 270 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 FCRL4Q96PJ5 515 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 GPN2Q9H9Y4 310 aaPredicted RBP17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 LNPEPQ9UIQ6 1025 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 CDYLQ9Y232 598 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 CRYL1Q9Y2S2 319 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 TK2O00142 265 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 USP1O94782 785 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 ESR1P03372 595 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 MT-ND3P03897 115 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 CCNYL3P0C7X3 344 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 WT1P19544 449 aaPredicted RBP17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 CHRM3P20309 590 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 TUBB4BP68371 445 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 TUBB2AQ13885 445 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 TTC23LQ6PF05 361 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 UNC5DQ6UXZ4 953 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 SYDE1Q6ZW31 735 aaPredicted RBP17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 GALNT6Q8NCL4 622 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 SKA2Q8WVK7 121 aaPredicted RBP17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 LPGAT1Q92604 370 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 WBP1Q96G27 269 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 SIGLEC10Q96LC7 697 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 BIRC8Q96P09 236 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 TUBB2BQ9BVA1 445 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 FANCEQ9HB96 536 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 INTS10Q9NVR2 710 aaKnown RBP17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 IL1RAPL1Q9NZN1 696 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 OR6C2Q9NZP2 312 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 RNF14Q9UBS8 474 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 PLAGL1Q9UM63 463 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 BTRCQ9Y297 605 aa17.78■□□□□ 0.44
SYNGR3-204ENST00000564642 LOC101059948A0A1B0GTJ6 334 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 ZCWPW2A0A1B0GU75 182 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 CCDC188H7C350 402 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 CHRM5P08912 532 aaPredicted RBP17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 PTGIRP43119 386 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 MAGEA3P43357 314 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 ADARP55265 1226 aaKnown RBP17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 DR1Q01658 176 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 GPR19Q15760 415 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 LONRF1Q17RB8 773 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 CTSL3PQ5NE16 218 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 PLEKHS1Q5SXH7 462 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 IZUMO3Q5VZ72 239 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 ZNF470Q6ECI4 717 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 PWWP2BQ6NUJ5 590 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 CENPUQ71F23 418 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 UNC5BQ8IZJ1 945 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 OR8K5Q8NH50 307 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 CALML6Q8TD86 181 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 TTC9Q92623 222 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 KCND1Q9NSA2 647 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 C20orf96Q9NUD7 363 aaPredicted RBP17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 MRFAP1Q9Y605 127 aa17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.77■□□□□ 0.44
SYNGR3-204ENST00000564642 ISM1B1AKI9 464 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 E5RI56 91 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 ST6GAL1P15907 406 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 STAT5AP42229 794 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 KYNUQ16719 465 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 SPESP1Q6UW49 350 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 TMEM126BQ8IUX1 230 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 DCUN1D3Q8IWE4 304 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 LMNTD2Q8IXW0 634 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 AGGF1Q8N302 714 aaeCLIP17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 ZNF501Q96CX3 271 aaPredicted RBP17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 FOPNLQ96NB1 174 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 TRAPPC9Q96Q05 1148 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 ARHGAP9Q9BRR9 750 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 SLC12A9Q9BXP2 914 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 PITPNM3Q9BZ71 974 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 KLHL25Q9H0H3 589 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 CCDC68Q9H2F9 335 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 SYTL2Q9HCH5 934 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 PADI1Q9ULC6 663 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 FAM169AQ9Y6X4 670 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 IGSF10Q6WRI0 2623 aa17.76■□□□□ 0.43
SYNGR3-204ENST00000564642 ZNF891A8MT65 544 aaPredicted RBP17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 NIPSNAP2O75323 286 aa17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 TIAF1O95411 115 aa17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 S1PR4O95977 384 aa17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 NTRK1P04629 796 aa17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 ITGB2P05107 769 aa17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 TPBGLP0DKB5 382 aa17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 PKMP14618 531 aaKnown RBP17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 UGT2B7P16662 529 aa17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 RAB28P51157 221 aa17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 CYP4F2P78329 520 aa17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 CTBP1Q13363 440 aa17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 GABPB2Q8TAK5 448 aaPredicted RBP17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 FAM136AQ96C01 138 aa17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 SLC45A3Q96JT2 553 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms