RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 PRAC1Q96KF2 57 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 C18orf12Q96KH6 178 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 UBXN10Q96LJ8 280 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 CABLES2Q9BTV7 478 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 TMX4Q9H1E5 349 aaPredicted RBP2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 PIGMQ9H3S5 423 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 BRF2Q9HAW0 419 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 ZBTB20Q9HC78 741 aaPredicted RBP2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 SIX2Q9NPC8 291 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 SLC38A7Q9NVC3 462 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 PPP1R14DQ9NXH3 145 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 OGFRQ9NZT2 677 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 TMEM181Q9P2C4 612 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 GJD2Q9UKL4 321 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 KCNJ14Q9UNX9 436 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 NAALADL1Q9UQQ1 740 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 B3GALT5Q9Y2C3 310 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 CLIC4Q9Y696 253 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 REV3LO60673 3130 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 SPAG17Q6Q759 2223 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 DDX60Q8IY21 1712 aaKnown RBP2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 SPTBN1Q01082 2364 aaKnown RBP2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 RALGAPA2Q2PPJ7 1873 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 LRRK2Q5S007 2527 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 CARMIL3Q8ND23 1372 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 CACNA1EQ15878 2313 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 PCNX1Q96RV3 2341 aa2.22□□□□□ -2.05
SUB1P3-201ENST00000564581 ZSWIM8A7E2V4 1837 aa2.21□□□□□ -2.05
SUB1P3-201ENST00000564581 SOS1Q07889 1333 aaPredicted RBP2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 FRYQ5TBA9 3013 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 ANKRD36CQ5JPF3 1778 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 SDK1Q7Z5N4 2213 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 KALRNO60229 2985 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 H7C423 109 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 PPIP5K2O43314 1243 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 TPOP07202 933 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 IGHV4-38-2P0DP08 117 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 IGF2RP11717 2491 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 AZU1P20160 251 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 UBA1P22314 1058 aaKnown RBP2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 ABCD3P28288 659 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 EPHA2P29317 976 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 HOXA13P31271 388 aaPredicted RBP2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 HOXC9P31274 260 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 ELF1P32519 619 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 PAFAH1B1P43034 410 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 MLLT10P55197 1068 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 FOXD4Q12950 439 aaPredicted RBP2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 PTP4A2Q12974 167 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 DCTN2Q13561 401 aaKnown RBP2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 ENPP2Q13822 863 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 ZNF239Q16600 458 aaKnown RBP2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 SPINK14Q6IE38 97 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 LCN10Q6JVE6 187 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 CLEC4GQ6UXB4 293 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 SDCCAG8Q86SQ7 713 aaPredicted RBP2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 ANKRD18AQ8IVF6 992 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 RASGEF1CQ8N431 466 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 ANKRD42Q8N9B4 389 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 OR1J2Q8NGS2 313 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 HM13Q8TCT9 377 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 RAET1EQ8TD07 263 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 ZKSCAN4Q969J2 545 aaPredicted RBP2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 SEMA3CQ99985 751 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 HERPUD2Q9BSE4 406 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 APOBEC3GQ9HC16 384 aaKnown RBP2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 ZCCHC17Q9NP64 241 aaKnown RBP2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 ZDHHC18Q9NUE0 388 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 ABI3Q9P2A4 366 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 TBX20Q9UMR3 447 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 COMMD10Q9Y6G5 202 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 VPS13AQ96RL7 3174 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 COL4A5P29400 1685 aa2.21□□□□□ -2.06
SUB1P3-201ENST00000564581 PTPRQQ9UMZ3 2332 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 CFAP46Q8IYW2 2715 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 FRMPD3Q5JV73 1810 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 PHIPQ8WWQ0 1821 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 GOLGA4Q13439 2230 aaKnown RBP2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 MED19A0JLT2 244 aaPredicted RBP2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 TTC36A6NLP5 189 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 EIF4E1BA6NMX2 242 aaKnown RBP2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 E9PQ18 207 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 H3BQ06 376 aaPredicted RBP2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 NPHP1O15259 732 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 PLPP2O43688 288 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 PDE9AO76083 593 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 F9P00740 461 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 ICAM1P05362 532 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 ANXA7P20073 488 aaKnown RBP2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 ICAM3P32942 547 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 NR2C2P49116 596 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 HARS2P49590 506 aaKnown RBP2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 TUBP50607 506 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 F2RL1P55085 397 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 TLE2Q04725 743 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 TRPC3Q13507 836 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 TUBB2AQ13885 445 aa2.2□□□□□ -2.06
SUB1P3-201ENST00000564581 FRG1Q14331 258 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms