RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 RUBCNLQ9H714 662 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 TMPRSS4Q9NRS4 437 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 IGSF5Q9NSI5 407 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 SEPT10Q9P0V9 454 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 KLHL8Q9P2G9 620 aaPredicted RBP10.86□□□□□ -0.67
TCF4-222ENST00000564228 IRAK3Q9Y616 596 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 A0A1W2PP18 115 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 FADS2P1A8MWK0 482 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 B8ZZF3 427 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 SLC16A6O15403 523 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 ZW10O43264 779 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 EEDO75530 441 aaKnown RBP10.86□□□□□ -0.67
TCF4-222ENST00000564228 MFN2O95140 757 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 AHSGP02765 367 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 RBP1P09455 135 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 HRH2P25021 359 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 PTPN3P26045 913 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 HTR3AP46098 478 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 CXCR4P61073 352 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 POU4F1Q01851 419 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 NFYCQ13952 458 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 SUZ12Q15022 739 aaKnown RBP10.86□□□□□ -0.67
TCF4-222ENST00000564228 NPTX1Q15818 432 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 TYSND1Q2T9J0 566 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 RFX4Q33E94 735 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 PLEKHG6Q3KR16 790 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 HORMAD1Q86X24 394 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 GRAMD2AQ8IUY3 354 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 CCDC28AQ8IWP9 274 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 CLYBLQ8N0X4 340 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 METTL4Q8N3J2 472 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 LGALS12Q96DT0 336 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 CEP295NLQ96MC4 621 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 TMEM246Q9BRR3 403 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 TTLL2Q9BWV7 592 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 MAGEB5Q9BZ81 275 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 AMBRA1Q9C0C7 1298 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 PRDM12Q9H4Q4 367 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 DUSP21Q9H596 190 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 AKTIPQ9H8T0 292 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 SLC28A3Q9HAS3 691 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 FBRSL1Q9HCM7 1045 aaKnown RBP10.86□□□□□ -0.67
TCF4-222ENST00000564228 TMEM45AQ9NWC5 275 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 COMMD8Q9NX08 183 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 OPTCQ9UBM4 332 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 TPRKBQ9Y3C4 175 aa10.86□□□□□ -0.67
TCF4-222ENST00000564228 NUP205Q92621 2012 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 G3V2T6 193 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 H3BNC9 293 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 PSMD3O43242 534 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 VPS4BO75351 444 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 TBX18O95935 607 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 F9P00740 461 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 LRG1P02750 347 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 C8AP07357 584 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 FGF4P08620 206 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 ITGAMP11215 1152 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 NCK1P16333 377 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 HMGA1P17096 107 aaKnown RBP10.85□□□□□ -0.67
TCF4-222ENST00000564228 AGXTP21549 392 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 NMBRP28336 390 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 PRIM2P49643 509 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 NCS1P62166 190 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 PIGFQ07326 219 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 EFEMP1Q12805 493 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 RAB30Q15771 203 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 C10orf120Q5SQS8 335 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 CERCAMQ5T4B2 595 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 AGAP9Q5VTM2 703 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 LILRA6Q6PI73 481 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 GDPD3Q7L5L3 318 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 BNIPLQ7Z465 357 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 RBM23Q86U06 439 aaKnown RBP10.85□□□□□ -0.67
TCF4-222ENST00000564228 PHYKPLQ8IUZ5 450 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 PYROXD2Q8N2H3 581 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 AADATQ8N5Z0 425 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 ESX1Q8N693 406 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 LSMEM1Q8N8F7 131 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 KREMEN2Q8NCW0 462 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 SETD9Q8NE22 299 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 MCOLN3Q8TDD5 553 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 ZHX1-C8orf76Q96EF9 292 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 SEPHS2Q99611 448 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 CCDC90BQ9GZT6 254 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 IRF2BPLQ9H1B7 796 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 SMOC2Q9H3U7 446 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 WDCPQ9H6R7 721 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 CCSER2Q9H7U1 834 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 WDR6Q9NNW5 1121 aaKnown RBP10.85□□□□□ -0.67
TCF4-222ENST00000564228 CCNB1IP1Q9NPC3 277 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 DDX28Q9NUL7 540 aaKnown RBP10.85□□□□□ -0.67
TCF4-222ENST00000564228 DNAJB9Q9UBS3 223 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 UBA2Q9UBT2 640 aaPredicted RBP10.85□□□□□ -0.67
TCF4-222ENST00000564228 KCNN3Q9UGI6 736 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 C3orf18Q9UK00 162 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 FBXW11Q9UKB1 542 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 TRHDEQ9UKU6 1024 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 PCDHGA10Q9Y5H3 936 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 HSPE1-MOB4S4R3N1 261 aa10.85□□□□□ -0.67
TCF4-222ENST00000564228 LOC100130705A0A1B0GUX0 176 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms