RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ADAM2Q99965 735 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 AASDHPPTQ9NRN7 309 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 UCKL1Q9NWZ5 548 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 PAQR5Q9NXK6 330 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-209ENST00000564068 ZNF224Q9NZL3 707 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 CLEC4AQ9UMR7 237 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 PCDHGA8Q9Y5G5 932 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 KIAA0100Q14667 2235 aaKnown RBP12.38□□□□□ -0.43
COMMD4-209ENST00000564068 COL18A1P39060 1754 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 OPN1SWP03999 348 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 OR56A5P0C7T3 313 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 APOFQ13790 326 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 SPCS2Q15005 226 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 ENPP6Q6UWR7 440 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 SH2D5Q6ZV89 423 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 OSTM1Q86WC4 334 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 SPARTQ8N0X7 666 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 ATAD1Q8NBU5 361 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 NDNFQ8TB73 568 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 ATL1Q8WXF7 558 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 NARS2Q96I59 477 aaKnown RBP12.38□□□□□ -0.43
COMMD4-209ENST00000564068 SLC30A3Q99726 388 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 PTGFRNQ9P2B2 879 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 MARCH4Q9P2E8 410 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-209ENST00000564068 COMMD3Q9UBI1 195 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 POU2F3Q9UKI9 436 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 CFL2Q9Y281 166 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 PCDHGA4Q9Y5G9 962 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 TSPAN4O14817 238 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 DCLK1O15075 740 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 MITFO75030 526 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-209ENST00000564068 PSKH1P11801 424 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 RHOQP17081 205 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 PAICSP22234 425 aaKnown RBP12.38□□□□□ -0.43
COMMD4-209ENST00000564068 FOXA1P55317 472 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 TAZQ16635 292 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 TBRG1Q3YBR2 411 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 NHSL2Q5HYW2 709 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 RETSATQ6NUM9 610 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 DEF8Q6ZN54 512 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 CYP2U1Q7Z449 544 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 MFSD2AQ8NA29 543 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 EEF1AKMT1Q8WVE0 214 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 IPCEF1Q8WWN9 437 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-209ENST00000564068 FCGR1BQ92637 280 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 DSN1Q9H410 356 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 FAM124BQ9H5Z6 455 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-209ENST00000564068 TRPM5Q9NZQ8 1165 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 ST3GAL5Q9UNP4 418 aa12.38□□□□□ -0.43
COMMD4-209ENST00000564068 MYH14Q7Z406 1995 aaKnown RBP12.37□□□□□ -0.43
COMMD4-209ENST00000564068 PRR23AA6NEV1 266 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 TMX2-CTNND1H3BSU7 103 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 SSNA1O43805 119 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 ARRB2P32121 409 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 CD68P34810 354 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-209ENST00000564068 ATP4BP51164 291 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 PPP5CP53041 499 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 CDKN2DP55273 166 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 CSNK2BP67870 215 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 MVKQ03426 396 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.37□□□□□ -0.43
COMMD4-209ENST00000564068 CPTPQ5TA50 214 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 ITIH5Q86UX2 942 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 RETREG3Q86VR2 466 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 OR4F6Q8NGB9 312 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 ZNF641Q96N77 438 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-209ENST00000564068 MMP27Q9H306 513 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 MRPL39Q9NYK5 338 aaKnown RBP12.37□□□□□ -0.43
COMMD4-209ENST00000564068 DYRK1BQ9Y463 629 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 RAI2Q9Y5P3 530 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 PLCH1Q4KWH8 1693 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 N4BP2Q86UW6 1770 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-209ENST00000564068 CKMP06732 381 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 YES1P07947 543 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 ATF4P18848 351 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-209ENST00000564068 HTR1EP28566 365 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 PBX3P40426 434 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 HCAR3P49019 387 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 FPGSQ05932 587 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 CLCA4Q14CN2 919 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 ELMSAN1Q6PJG2 1045 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 OR13J1Q8NGT2 312 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 VANGL1Q8TAA9 524 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-209ENST00000564068 BTN2A2Q8WVV5 523 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 PYCR2Q96C36 320 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 POLR2J2Q9GZM3 115 aaKnown RBP12.37□□□□□ -0.43
COMMD4-209ENST00000564068 CAPN10Q9HC96 672 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 C11orf16Q9NQ32 467 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 FAM105AQ9NUU6 356 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 TMLHEQ9NVH6 421 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 ERVK13-1Q9NX77 482 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 CLDN9O95484 217 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 TBX18O95935 607 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 ITGB1P05556 798 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 DDX5P17844 614 aaKnown RBP12.37□□□□□ -0.43
COMMD4-209ENST00000564068 CD247P20963 164 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 DNAJA1P31689 397 aaKnown RBP12.37□□□□□ -0.43
COMMD4-209ENST00000564068 ARSDP51689 593 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 TUBA1BP68363 451 aa12.37□□□□□ -0.43
COMMD4-209ENST00000564068 CAMK2GQ13555 558 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms