RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 ZNF839A8K0R7 811 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 CXorf49A8MYA2 514 aaPredicted RBP18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 MATN2O00339 956 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 SLC16A5O15375 505 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 CATP04040 527 aaKnown RBP18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 C8GP07360 202 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 CELA2BP08218 269 aaPredicted RBP18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 SNRPAP09012 282 aaKnown RBP18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 MAP4P27816 1152 aaKnown RBP18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 HSD17B3P37058 310 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 HSD17B2P37059 387 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 TMPRSS3P57727 454 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 RAB10P61026 200 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 NR1D2Q14995 579 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 SEPT7Q16181 437 aaKnown RBP18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 RPE65Q16518 533 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 BROXQ5VW32 411 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 ADGRD1Q6QNK2 874 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 ZNF438Q7Z4V0 828 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 TDRPQ86YL5 185 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 DCUN1D3Q8IWE4 304 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 SLC35F3Q8IY50 421 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 LSMEM2Q8N112 164 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 KRT222Q8N1A0 295 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 CD200R1Q8TD46 325 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 SLC37A2Q8TED4 501 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 NDNQ99608 321 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 SLC38A3Q99624 504 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 TRIM54Q9BYV2 358 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 GPAMQ9HCL2 828 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 SIRPGQ9P1W8 387 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 TLK1Q9UKI8 766 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 SLC39A10Q9ULF5 831 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 ASF1AQ9Y294 204 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 PLEKHM1Q9Y4G2 1056 aa18.42■□□□□ 0.54
SYNGR3-203ENST00000563869 A0A087X1B8 175 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 IQCF5A8MTL0 148 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 POC1B-GALNT4F8VUJ3 575 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 DXOO77932 396 aaKnown RBP18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 ITGB6P18564 788 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 KPNA2P52292 529 aaKnown RBP18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 UBE2IP63279 158 aaKnown RBP18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 CDCP2Q5VXM1 449 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 FAM83HQ6ZRV2 1179 aaPredicted RBP18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 TBC1D1Q86TI0 1168 aaPredicted RBP18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 KYQ8NBH2 561 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 FBXO15Q8NCQ5 510 aaPredicted RBP18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 ACVR1CQ8NER5 493 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 OR10G6Q8NH81 332 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 OR5K2Q8NHB8 316 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 RAD51AP1Q96B01 352 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 NAF1Q96HR8 494 aaKnown RBP18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 TSNARE1Q96NA8 513 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 DHRS4Q9BTZ2 278 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 SLC40A1Q9NP59 571 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 IMP3Q9NV31 184 aaKnown RBP18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 LRIT1Q9P2V4 623 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 FAM8A1Q9UBU6 413 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 ST14Q9Y5Y6 855 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 ATMQ13315 3056 aa18.41■□□□□ 0.54
SYNGR3-203ENST00000563869 ZBTB14O43829 449 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 MATN4O95460 622 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 MPOP05164 745 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 ENO2P09104 434 aaPredicted RBP18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 COL6A2P12110 1019 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 ZNF37AP17032 561 aaPredicted RBP18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 ACADLP28330 430 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 ATP6V0D1P61421 351 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 KLC3Q6P597 504 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 TMEM26Q6ZUK4 368 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 RAPH1Q70E73 1250 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 ACMSDQ8TDX5 336 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 GRAMD1AQ96CP6 724 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 CCDC97Q96F63 343 aaPredicted RBP18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 ATXN7L3BQ96GX2 97 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 RMDN2Q96LZ7 410 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 ABCG4Q9H172 646 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 KIR3DX1Q9H7L2 352 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 CPNE5Q9HCH3 593 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 CDYLQ9Y232 598 aa18.4■□□□□ 0.54
SYNGR3-203ENST00000563869 COL6A6A6NMZ7 2263 aa18.39■□□□□ 0.54
SYNGR3-203ENST00000563869 TMX2-CTNND1H3BSU7 103 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 OPA1O60313 960 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 HIST1H2AGP0C0S8 130 aaPredicted RBP18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 BRAFP15056 766 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 HIST1H2ADP20671 130 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 CYP2A7P20853 494 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 TYK2P29597 1187 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 SHMT2P34897 504 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 PREPP48147 710 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 LSSP48449 732 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 ERVPABLB-1P60509 514 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 GABREP78334 506 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 CLCA4Q14CN2 919 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 TCEA2Q15560 299 aa18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 ZKSCAN8Q15776 578 aaPredicted RBP18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 RBM20Q5T481 1227 aaKnown RBP18.39■□□□□ 0.53
SYNGR3-203ENST00000563869 ADAMTSL2Q86TH1 951 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms