RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 CFAP61Q8NHU2 1237 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 MAIP1Q8WWC4 291 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 GPR87Q9BY21 358 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 EPN3Q9H201 632 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 SPHK1Q9NYA1 384 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 MARCH4Q9P2E8 410 aaPredicted RBP17.11■□□□□ 0.33
NME3-205ENST00000563854 POLG2Q9UHN1 485 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 SERTAD3Q9UJW9 196 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 RIMKLBQ9ULI2 386 aa17.11■□□□□ 0.33
NME3-205ENST00000563854 FARSAQ9Y285 508 aaKnown RBP17.11■□□□□ 0.33
NME3-205ENST00000563854 ISM1B1AKI9 464 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 E7EQ34 232 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 MEN1O00255 615 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 DNAJB5O75953 348 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 CHRM5P08912 532 aaPredicted RBP17.1■□□□□ 0.33
NME3-205ENST00000563854 CCR7P32248 378 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 VPS41P49754 854 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 CSRP3P50461 194 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 PMS2P54278 862 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 ITGA1P56199 1179 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 PLOD1Q02809 727 aaPredicted RBP17.1■□□□□ 0.33
NME3-205ENST00000563854 CHAF1BQ13112 559 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 IL10RAQ13651 578 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 PLEKHS1Q5SXH7 462 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 FAM69BQ5VUD6 431 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 PTRHD1Q6GMV3 140 aaKnown RBP17.1■□□□□ 0.33
NME3-205ENST00000563854 SYVN1Q86TM6 617 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 VRK3Q8IV63 474 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 LRRC8AQ8IWT6 810 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 DSELQ8IZU8 1212 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 ENDOVQ8N8Q3 282 aaKnown RBP17.1■□□□□ 0.33
NME3-205ENST00000563854 TRIM58Q8NG06 486 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 OR5K2Q8NHB8 316 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 SYTL2Q9HCH5 934 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 EIF2B3Q9NR50 452 aaKnown RBP17.1■□□□□ 0.33
NME3-205ENST00000563854 IRAK4Q9NWZ3 460 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 TTC7AQ9ULT0 858 aaPredicted RBP17.1■□□□□ 0.33
NME3-205ENST00000563854 SNX7Q9UNH6 387 aa17.1■□□□□ 0.33
NME3-205ENST00000563854 ARGFXA6NJG6 315 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 K7EM74 188 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 NRDCO43847 1150 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 KDM1AO60341 852 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 MGAT1P26572 445 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 TMED2Q15363 201 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 TRIP13Q15645 432 aaPredicted RBP17.09■□□□□ 0.33
NME3-205ENST00000563854 UGT8Q16880 541 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 ZNF789Q5FWF6 425 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 CPZQ66K79 652 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 TAX1BP1Q86VP1 789 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 SYTL1Q8IYJ3 562 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 GPR135Q8IZ08 494 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 C2orf73Q8N5S3 287 aaPredicted RBP17.09■□□□□ 0.33
NME3-205ENST00000563854 SEC14L1Q92503 715 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 OR2A14Q96R47 310 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 FAM60AQ9NP50 221 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 PCMTD2Q9NV79 361 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 BFARQ9NZS9 450 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 ANAPC2Q9UJX6 822 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 TLK1Q9UKI8 766 aa17.09■□□□□ 0.33
NME3-205ENST00000563854 DRG1Q9Y295 367 aaKnown RBP17.09■□□□□ 0.33
NME3-205ENST00000563854 BSNQ9UPA5 3926 aa17.08■□□□□ 0.33
NME3-205ENST00000563854 A0A0J9YY10 115 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 PRMT5O14744 637 aaPredicted RBP17.08■□□□□ 0.32
NME3-205ENST00000563854 CD3EAPO15446 510 aaKnown RBP17.08■□□□□ 0.32
NME3-205ENST00000563854 ZNF749O43361 778 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 APOA4P06727 396 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 TPBGLP0DKB5 382 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 NMBRP28336 390 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 TTPAP49638 278 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 CCZ1BP86790 482 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 CCZ1P86791 482 aaPredicted RBP17.08■□□□□ 0.32
NME3-205ENST00000563854 DNAJC21Q5F1R6 531 aaKnown RBP17.08■□□□□ 0.32
NME3-205ENST00000563854 IZUMO3Q5VZ72 239 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 DRICH1Q6PGQ1 229 aaPredicted RBP17.08■□□□□ 0.32
NME3-205ENST00000563854 CES3Q6UWW8 571 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 C4orf22Q6V702 233 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 ZNF662Q6ZS27 426 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 FAM20CQ8IXL6 584 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 SLC22A15Q8IZD6 547 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 LMNTD1Q8N9Z9 388 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 GSDMBQ8TAX9 411 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 SKA2Q8WVK7 121 aaPredicted RBP17.08■□□□□ 0.32
NME3-205ENST00000563854 ASZ1Q8WWH4 475 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 PEX13Q92968 403 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 LRFN5Q96NI6 719 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 AP1M1Q9BXS5 423 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 TRIM55Q9BYV6 548 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 IL22Q9GZX6 179 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 SYBUQ9NX95 663 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 OR6C2Q9NZP2 312 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 TSR3Q9UJK0 312 aaKnown RBP17.08■□□□□ 0.32
NME3-205ENST00000563854 ZKSCAN5Q9Y2L8 839 aa17.08■□□□□ 0.32
NME3-205ENST00000563854 NDUFS3O75489 264 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 OR2B3O76000 313 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 RECKO95980 971 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 RPN2P04844 631 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 PKLRP30613 574 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 RORAP35398 523 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 CASRP41180 1078 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 EIF3BP55884 814 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms