RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 SH3GLB1Q9Y371 365 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 MAGED1Q9Y5V3 778 aaPredicted RBP12.81□□□□□ -0.36
USB1-207ENST00000563149 HSPE1-MOB4S4R3N1 261 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 GAPDHSO14556 408 aaPredicted RBP12.81□□□□□ -0.36
USB1-207ENST00000563149 WNT9AO14904 365 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 TSPAN3O60637 253 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 PRAMEF1O95521 474 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 GUCA1CO95843 209 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 ACRV1P26436 265 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 DCTP40126 519 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 CD97P48960 835 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 ACLYP53396 1101 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 PLA2G16P53816 162 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 CLDN8P56748 225 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 ISL1P61371 349 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 PHEXP78562 749 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 GSTM4Q03013 218 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 CD47Q08722 323 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 ABHD18Q0P651 414 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 MEP1AQ16819 746 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 GPRC6AQ5T6X5 926 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 SLC8B1Q6J4K2 584 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 RGMBQ6NW40 437 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 SPESP1Q6UW49 350 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 DCDC5Q6ZRR9 648 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 RGL4Q8IZJ4 473 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 CBARPQ8N350 705 aaPredicted RBP12.81□□□□□ -0.36
USB1-207ENST00000563149 TMEM132CQ8N3T6 1108 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 ARL10Q8N8L6 244 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 SETD9Q8NE22 299 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 FBXO22Q8NEZ5 403 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 BPIFB6Q8NFQ5 453 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 FAM120BQ96EK7 910 aaKnown RBP12.81□□□□□ -0.36
USB1-207ENST00000563149 PYURFQ96I23 114 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 ITCHQ96J02 903 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 CPPED1Q9BRF8 314 aaPredicted RBP12.81□□□□□ -0.36
USB1-207ENST00000563149 HTATIP2Q9BUP3 242 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 TRIT1Q9H3H1 467 aaKnown RBP12.81□□□□□ -0.36
USB1-207ENST00000563149 ZFYVE1Q9HBF4 777 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 BAG5Q9UL15 447 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 LOC730098B7Z3J9 87 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 CFAP99D6REC4 459 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 NPIPB8E9PQR5 432 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 H0Y626 953 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 M0QX08 132 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 EIF3FO00303 357 aaPredicted RBP12.8□□□□□ -0.36
USB1-207ENST00000563149 HOXA2O43364 376 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 FOXD2O60548 495 aaPredicted RBP12.8□□□□□ -0.36
USB1-207ENST00000563149 UGT2B11O75310 529 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 CLDN9O95484 217 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 GALTP07902 379 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 OCM2P0CE71 109 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 OCMP0CE72 109 aaPredicted RBP12.8□□□□□ -0.36
USB1-207ENST00000563149 IL7RP16871 459 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 PRPH2P23942 346 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 MAPK1P28482 360 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 MAPK8P45983 427 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 PPP3CCP48454 512 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 CSNK1DP48730 415 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 GZMMP51124 257 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 RPS14P62263 151 aaKnown RBP12.8□□□□□ -0.36
USB1-207ENST00000563149 PLIN5Q00G26 463 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 SREBF2Q12772 1141 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 NFATC2Q13469 925 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 BFSP2Q13515 415 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 ACOX1Q15067 660 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 AAK1Q2M2I8 961 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 LINGO4Q6UY18 593 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 DCP2Q8IU60 420 aaKnown RBP12.8□□□□□ -0.36
USB1-207ENST00000563149 SNRNP27Q8WVK2 155 aaKnown RBP12.8□□□□□ -0.36
USB1-207ENST00000563149 NODALQ96S42 347 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 MRPL9Q9BYD2 267 aaKnown RBP12.8□□□□□ -0.36
USB1-207ENST00000563149 GABARAPL1Q9H0R8 117 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 IKZF5Q9H5V7 419 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 GKN1Q9NS71 199 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 DNMT3BQ9UBC3 853 aaKnown RBP12.8□□□□□ -0.36
USB1-207ENST00000563149 ENPP5Q9UJA9 477 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 ERVW-1Q9UQF0 538 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 ERGIC3Q9Y282 383 aa12.8□□□□□ -0.36
USB1-207ENST00000563149 SERTM1A2A2V5 107 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 SLC1A7O00341 560 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 FFAR3O14843 346 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 PER2O15055 1255 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 GPR42O15529 346 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 CA12O43570 354 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 HS6ST1O60243 411 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 NOBOXO60393 691 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 MRPS14O60783 128 aaKnown RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 E2F6O75461 281 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 STK16O75716 305 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 TRIM16O95361 564 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 PRAMEF12O95522 483 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 TRBC1P01850 177 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 ANXA5P08758 320 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 SLC10A3P09131 477 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 BCKDHAP12694 445 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 ACPPP15309 386 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 HMGA1P17096 107 aaKnown RBP12.79□□□□□ -0.36
USB1-207ENST00000563149 CTPS1P17812 591 aa12.79□□□□□ -0.36
USB1-207ENST00000563149 PCMT1P22061 227 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms