RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 ARHGEF33A8MVX0 844 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 DUX1O43812 170 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 MT-ND3P03897 115 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 LTA4HP09960 611 aaKnown RBP18.3■□□□□ 0.52
RAB40C-207ENST00000563109 CDK4P11802 303 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 H2AFXP16104 143 aaPredicted RBP18.3■□□□□ 0.52
RAB40C-207ENST00000563109 SHMT2P34897 504 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 MAGEA12P43365 314 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 SIM1P81133 766 aaPredicted RBP18.3■□□□□ 0.52
RAB40C-207ENST00000563109 KRT71Q3SY84 523 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 KLC3Q6P597 504 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 KLHL35Q6PF15 583 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 LRIG3Q6UXM1 1119 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 TIFABQ6ZNK6 161 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 ADAMTSL2Q86TH1 951 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 OR52E1Q8NGJ3 308 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 WDR48Q8TAF3 677 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 ANKRD49Q8WVL7 239 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 TMEM109Q9BVC6 243 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 RAB11FIP5Q9BXF6 653 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 TBC1D10AQ9BXI6 508 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 TRIM54Q9BYV2 358 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 ABCG4Q9H172 646 aa18.3■□□□□ 0.52
RAB40C-207ENST00000563109 GOLGA4Q13439 2230 aaKnown RBP18.29■□□□□ 0.52
RAB40C-207ENST00000563109 FAM221BA6H8Z2 402 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 NPEPPSL1A6NEC2 478 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 GFYI3L273 518 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 KCNK5O95279 499 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 SYF2O95926 243 aaKnown RBP18.29■□□□□ 0.52
RAB40C-207ENST00000563109 RPLP0P05388 317 aaKnown RBP18.29■□□□□ 0.52
RAB40C-207ENST00000563109 ENO2P09104 434 aaPredicted RBP18.29■□□□□ 0.52
RAB40C-207ENST00000563109 HIST1H2AGP0C0S8 130 aaPredicted RBP18.29■□□□□ 0.52
RAB40C-207ENST00000563109 AMD1P17707 334 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 HIST1H2ADP20671 130 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 OR1D5P58170 312 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 E2F1Q01094 437 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 ZNF844Q08AG5 666 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 FAM83EQ2M2I3 478 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 FRA10AC1Q70Z53 315 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 FBXO15Q8NCQ5 510 aaPredicted RBP18.29■□□□□ 0.52
RAB40C-207ENST00000563109 MCOLN3Q8TDD5 553 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 JPH3Q8WXH2 748 aaPredicted RBP18.29■□□□□ 0.52
RAB40C-207ENST00000563109 HIST1H2AHQ96KK5 128 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 UBXN10Q96LJ8 280 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 ZIM3Q96PE6 472 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 HIST1H2AJQ99878 128 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 H2AFJQ9BTM1 129 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 SRMSQ9H3Y6 488 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 TFB2MQ9H5Q4 396 aaKnown RBP18.29■□□□□ 0.52
RAB40C-207ENST00000563109 PARVBQ9HBI1 364 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 NMRAL1Q9HBL8 299 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 PCMTD2Q9NV79 361 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 EURLQ9NYK6 297 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 SPATA7Q9P0W8 599 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 LGALS13Q9UHV8 139 aa18.29■□□□□ 0.52
RAB40C-207ENST00000563109 WDR87Q6ZQQ6 2873 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 IGHV1OR21-1A0A087WYE8 117 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 UBXN7O94888 489 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 PROS1P07225 676 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 FTH1P19P0C7X4 201 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 CSRP3P50461 194 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 KPNA2P52292 529 aaKnown RBP18.28■□□□□ 0.52
RAB40C-207ENST00000563109 IRF9Q00978 393 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 CASP8Q14790 479 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 AMZ1Q400G9 498 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.28■□□□□ 0.52
RAB40C-207ENST00000563109 PPM1JQ5JR12 505 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 CEP85LQ5SZL2 805 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 ARMC6Q6NXE6 501 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 FBXO38Q6PIJ6 1188 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 AMIGO1Q86WK6 493 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 OOSP2Q86WS3 158 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 IQCKQ8N0W5 287 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 SPATA6LQ8N4H0 392 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 OR9A1PQ8NGU1 263 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 ACMSDQ8TDX5 336 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 KCTD4Q8WVF5 259 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 SLC12A9Q9BXP2 914 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 LRRN3Q9H3W5 708 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 LNPEPQ9UIQ6 1025 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 ADAMTS6Q9UKP5 1117 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 PLAGL1Q9UM63 463 aa18.28■□□□□ 0.52
RAB40C-207ENST00000563109 NOVA2Q9UNW9 492 aaKnown RBP18.28■□□□□ 0.52
RAB40C-207ENST00000563109 PTPRZ1P23471 2315 aaPredicted RBP18.28■□□□□ 0.52
RAB40C-207ENST00000563109 DNAH14Q0VDD8 3507 aa18.27■□□□□ 0.52
RAB40C-207ENST00000563109 ZNF839A8K0R7 811 aa18.27■□□□□ 0.52
RAB40C-207ENST00000563109 MYO1CO00159 1063 aa18.27■□□□□ 0.52
RAB40C-207ENST00000563109 CDC7O00311 574 aa18.27■□□□□ 0.52
RAB40C-207ENST00000563109 RFPL1O75677 317 aa18.27■□□□□ 0.52
RAB40C-207ENST00000563109 KLHL2O95198 593 aa18.27■□□□□ 0.52
RAB40C-207ENST00000563109 COL6A2P12110 1019 aa18.27■□□□□ 0.52
RAB40C-207ENST00000563109 CD1DP15813 335 aa18.27■□□□□ 0.52
RAB40C-207ENST00000563109 TYRP1P17643 537 aa18.27■□□□□ 0.52
RAB40C-207ENST00000563109 PKLRP30613 574 aa18.27■□□□□ 0.52
RAB40C-207ENST00000563109 RAB28P51157 221 aa18.27■□□□□ 0.52
RAB40C-207ENST00000563109 CCL7P80098 99 aa18.27■□□□□ 0.52
RAB40C-207ENST00000563109 PRKAA1Q13131 559 aa18.27■□□□□ 0.52
RAB40C-207ENST00000563109 SPIDRQ14159 915 aa18.27■□□□□ 0.52
RAB40C-207ENST00000563109 PUM1Q14671 1186 aaKnown RBP eCLIP18.27■□□□□ 0.52
RAB40C-207ENST00000563109 TSNQ15631 228 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms