RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 PTGDR2Q9Y5Y4 395 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 H3BQ06 376 aaPredicted RBP13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 AIREO43918 545 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 LCKP06239 509 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 TGFBR2P37173 567 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 MLLT6P55198 1093 aaPredicted RBP13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 OR4D2P58180 307 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 RAB10P61026 200 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 LAPTM5Q13571 262 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 MBTPS1Q14703 1052 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 RPS6KA2Q15349 733 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 GPAT3Q53EU6 434 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 RAB41Q5JT25 222 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 TAC4Q86UU9 113 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 RNF135Q8IUD6 432 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 DCP1BQ8IZD4 617 aaKnown RBP13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 OR8H2Q8N162 312 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 AMER2Q8N7J2 671 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 LILRB1Q8NHL6 650 aaPredicted RBP13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 GPR152Q8TDT2 470 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 FRS2Q8WU20 508 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 PYCR2Q96C36 320 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 REXO5Q96IC2 774 aaKnown RBP13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 CDADC1Q9BWV3 514 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 UCK2Q9BZX2 261 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 ACOT13Q9NPJ3 140 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 TBC1D24Q9ULP9 559 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 UBFD1O14562 309 aaKnown RBP13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 ZNF623O75123 536 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 GOT2P00505 430 aaKnown RBP13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 AHSGP02765 367 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 FTH1P02794 183 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 ICAM2P13598 275 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 STMN1P16949 149 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 TPH1P17752 444 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 PRKACGP22612 351 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 RPL9P32969 192 aaKnown RBP13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 IL12RB1P42701 662 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 ACLYP53396 1101 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 SLC35A2P78381 396 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 SP3Q02447 781 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 FADDQ13158 208 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 TUSC3Q13454 348 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 RAPSNQ13702 412 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 DSC3Q14574 896 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 INTS6LQ5JSJ4 861 aaKnown RBP13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 SPANXN2Q5MJ10 180 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 SPESP1Q6UW49 350 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 B3GNT8Q7Z7M8 397 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 SCN4BQ8IWT1 228 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 PJA1Q8NG27 643 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 SLC7A6Q92536 515 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 KLHL8Q9P2G9 620 aaPredicted RBP13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 FBXW11Q9UKB1 542 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 TSC2P49815 1807 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 OR6C70A6NIJ9 312 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 CLDN24A6NM45 220 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 DSCR3O14972 297 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 DCLK1O15075 740 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 SLITRK5O94991 958 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 PRLP01236 227 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 RAP2AP10114 183 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 FOXM1Q08050 763 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 GRB7Q14451 532 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 METTL23Q86XA0 190 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 CACTIN-AS1Q8N1I8 211 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 CD99L2Q8TCZ2 262 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 SH3KBP1Q96B97 665 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 NECTIN4Q96NY8 510 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 BBS2Q9BXC9 721 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 SLAMF8Q9P0V8 285 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 TPRKBQ9Y3C4 175 aa13.76□□□□□ -0.21
GTF3C1-203ENST00000562609 LINC00854A0A1B0GVQ3 168 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 A8MT66 165 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 ZNF487B1APH4 448 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 ARHGEF9O43307 516 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 SNX4O95219 450 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 CKBP12277 381 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 ITGA2P17301 1181 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 NMBRP28336 390 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 CHRNB3Q05901 458 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 SPATS1Q496A3 300 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 FAM98BQ52LJ0 330 aaKnown RBP13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 PROSER1Q86XN7 944 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 TMEM199Q8N511 208 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 OR4M1Q8NGD0 313 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 ITFG1Q8TB96 612 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 DEDD2Q8WXF8 326 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 ZNF566Q969W8 418 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 SDHCQ99643 169 aaPredicted RBP13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 ACBD6Q9BR61 282 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 DUSP21Q9H596 190 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 PCDH10Q9P2E7 1040 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 HCSTQ9UBK5 93 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 FBXO10Q9UK96 956 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 MKLN1Q9UL63 735 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 GNGT2O14610 69 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 BCKDKO14874 412 aa13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 IPO13O94829 963 aaKnown RBP13.75□□□□□ -0.21
GTF3C1-203ENST00000562609 MOCS2O96007 188 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms