RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 PCDHGB1Q9Y5G3 927 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 PCDHGA10Q9Y5H3 936 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 F5H5T6 163 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 RAD51BO15315 384 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 FFAR2O15552 330 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 ZNF682O95780 498 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 GSNP06396 782 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 RETP07949 1114 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 HOXC8P31273 242 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 FPGSQ05932 587 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 TRAF3Q13114 568 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 CLCA4Q14CN2 919 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 HIST2H2ACQ16777 129 aaPredicted RBP13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 FAM110CQ1W6H9 321 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 NADSYN1Q6IA69 706 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 GDF6Q6KF10 455 aaPredicted RBP13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 CES5AQ6NT32 575 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 LINC00299Q6ZSB3 139 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 ADAMTSL2Q86TH1 951 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 ZDHHC21Q8IVQ6 265 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 TTC9BQ8N6N2 239 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 PSMA8Q8TAA3 256 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 ZNF566Q969W8 418 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 PYURFQ96I23 114 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 ADAM2Q99965 735 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 APOL5Q9BWW9 433 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 MAGIXQ9H6Y5 334 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 FBXO8Q9NRD0 319 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 PCDHB8Q9UN66 801 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 PMF1-BGLAPU3KQ54 211 aa13.69□□□□□ -0.22
VPS9D1-202ENST00000561976 PATJQ8NI35 1801 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 MYO1DO94832 1006 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 MYCLP1P12525 358 aaPredicted RBP13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 HOXD9P28356 352 aaPredicted RBP13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 GDF5P43026 501 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 ARHGDIAP52565 204 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 ATAD1Q8NBU5 361 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 GLB1L3Q8NCI6 653 aaPredicted RBP13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 YIPF6Q96EC8 236 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 UROC1Q96N76 676 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 PSKH2Q96QS6 385 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 KAT8Q9H7Z6 458 aaKnown RBP13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 DNMT3BQ9UBC3 853 aaKnown RBP13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 SLC45A1Q9Y2W3 748 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 TMED5Q9Y3A6 229 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 GMPPBQ9Y5P6 360 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 GBF1Q92538 1859 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 ZNF623O75123 536 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 ULK1O75385 1050 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 PRLP01236 227 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 ESR1P03372 595 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 MT-ND2P03891 347 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 ITGAMP11215 1152 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 SERPINB1P30740 379 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 PTGER3P43115 390 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 GNPDA1P46926 289 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 CLCN4P51793 760 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 ARPP19P56211 112 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 HUNKP57058 714 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 TAF10Q12962 218 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 ZC3H12BQ5HYM0 836 aaKnown RBP13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 ALG1LQ6GMV1 187 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 CYP4Z1Q86W10 505 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 DYNC2LI1Q8TCX1 351 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 MTFMTQ96DP5 389 aaKnown RBP13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 C8orf48Q96LL4 319 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 RHNO1Q9BSD3 238 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 SLC6A13Q9NSD5 602 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 OLA1Q9NTK5 396 aaKnown RBP13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 C1orf109Q9NX04 203 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 VNN3Q9NY84 501 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 ZNF490Q9ULM2 529 aaPredicted RBP13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 ARIH1Q9Y4X5 557 aaPredicted RBP13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 RAI2Q9Y5P3 530 aa13.68□□□□□ -0.22
VPS9D1-202ENST00000561976 MOXD2PA6NHM9 499 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 M0QX08 132 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 SLC28A1O00337 649 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 FAM20BO75063 409 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 NRIP1P48552 1158 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 CLCN7P51798 805 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 TPTEP56180 551 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 MAP2K5Q13163 448 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 NFE2Q16621 373 aaPredicted RBP13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 PTRHD1Q6GMV3 140 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 CXCL17Q6UXB2 119 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 OR52E4Q8NGH9 312 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 REXO5Q96IC2 774 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 PARK7Q99497 189 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 BARD1Q99728 777 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 LRTM1Q9HBL6 345 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 TLR8Q9NR97 1041 aaKnown RBP13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 AP3M1Q9Y2T2 418 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 PKP3Q9Y446 797 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 CCL27Q9Y4X3 112 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 A0A0U1RQF3 1178 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 MYADML2A6NDP7 307 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 FAM220BPB1ANY3 271 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 H0Y626 953 aa13.67□□□□□ -0.22
VPS9D1-202ENST00000561976 RGS10O43665 173 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms