RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 F10P00742 488 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 UMODP07911 640 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 UQCRHP07919 91 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 HOXD4P09016 255 aaPredicted RBP5.12□□□□□ -1.59
HERC1-213ENST00000561359 CBSLP0DN79 551 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 MYBL2P10244 700 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 ABOP16442 354 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 CTPS1P17812 591 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 MMP11P24347 488 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 HOXC12P31275 282 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 CBSP35520 551 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 FLT3P36888 993 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 DRG2P55039 364 aaKnown RBP5.12□□□□□ -1.59
HERC1-213ENST00000561359 AP1S1P61966 158 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 DCDP81605 110 aaKnown RBP5.12□□□□□ -1.59
HERC1-213ENST00000561359 PMP22Q01453 160 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 KEAP1Q14145 624 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 SLC9A5Q14940 896 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 CDO1Q16878 200 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 DEFB113Q30KQ7 82 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 ZCWPW2Q504Y3 356 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 ZNF648Q5T619 568 aaPredicted RBP5.12□□□□□ -1.59
HERC1-213ENST00000561359 LRRC66Q68CR7 880 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 HMBOX1Q6NT76 420 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 FBXO38Q6PIJ6 1188 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 CRTC3Q6UUV7 619 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 C16orf47Q6ZP98 133 aaPredicted RBP5.12□□□□□ -1.59
HERC1-213ENST00000561359 Q6ZPB1 254 aaPredicted RBP5.12□□□□□ -1.59
HERC1-213ENST00000561359 USP45Q70EL2 814 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 KRTAP19-1Q8IUB9 90 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 GPR135Q8IZ08 494 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 EID3Q8N140 333 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 POU5F2Q8N7G0 328 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 SIMC1Q8NDZ2 872 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 SUN3Q8TAQ9 357 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 PIWIL2Q8TC59 973 aaKnown RBP5.12□□□□□ -1.59
HERC1-213ENST00000561359 PHF10Q8WUB8 498 aaKnown RBP5.12□□□□□ -1.59
HERC1-213ENST00000561359 SPATA32Q96LK8 384 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 PPM1MQ96MI6 270 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 VKORC1Q9BQB6 163 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 UCK2Q9BZX2 261 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 RNF32Q9H0A6 362 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 OR2AG1Q9H205 316 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 CARD9Q9H257 536 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 PDFQ9HBH1 243 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 ARFGAP3Q9NP61 516 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 UBE2TQ9NPD8 197 aaPredicted RBP5.12□□□□□ -1.59
HERC1-213ENST00000561359 SAMSN1Q9NSI8 373 aaKnown RBP5.12□□□□□ -1.59
HERC1-213ENST00000561359 HRASLS2Q9NWW9 162 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 IL17CQ9P0M4 197 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 SLAMF8Q9P0V8 285 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 REV1Q9UBZ9 1251 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 CDC23Q9UJX2 597 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 NEU3Q9UQ49 428 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 CTNND2Q9UQB3 1225 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 CDYLQ9Y232 598 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 ZNF835Q9Y2P0 537 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.12□□□□□ -1.59
HERC1-213ENST00000561359 DOCK10Q96BY6 2186 aa5.12□□□□□ -1.59
HERC1-213ENST00000561359 CUBNO60494 3623 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 OR6C74A6NCV1 312 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 OR5K3A6NET4 321 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 LRRC10BA6NIK2 292 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 H7C1Q1 480 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 CNOT3O75175 753 aaKnown RBP5.11□□□□□ -1.59
HERC1-213ENST00000561359 MLYCDO95822 493 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 TSPAN12O95859 305 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 IFNA2P01563 188 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 RAF1P04049 648 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 BRAFP15056 766 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 ZNF30P17039 623 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 ZNF7P17097 686 aaPredicted RBP5.11□□□□□ -1.59
HERC1-213ENST00000561359 ZNF8P17098 575 aaPredicted RBP5.11□□□□□ -1.59
HERC1-213ENST00000561359 CDH3P22223 829 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 IDSP22304 550 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 KRT9P35527 623 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 HALP42357 657 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 RENBPP51606 427 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 NKX6-1P78426 367 aaPredicted RBP5.11□□□□□ -1.59
HERC1-213ENST00000561359 RUNX1T1Q06455 604 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 TFF3Q07654 80 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 NSUN2Q08J23 767 aaKnown RBP eCLIP5.11□□□□□ -1.59
HERC1-213ENST00000561359 KRTCAP3Q53RY4 240 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 RAB6CQ53S08 254 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 ZNF789Q5FWF6 425 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 AGAP9Q5VTM2 703 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 ABRAXAS1Q6UWZ7 409 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 CEP128Q6ZU80 1094 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 OOSP2Q86WS3 158 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 CREG2Q8IUH2 290 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 TMEM151BQ8IW70 566 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 ZZZ3Q8IYH5 903 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 CLYBLQ8N0X4 340 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 UMODL1-AS1Q8N2C9 162 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 LILRB4Q8NHJ6 448 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 LMO3Q8TAP4 145 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 CCDC110Q8TBZ0 833 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 THAP3Q8WTV1 239 aaPredicted RBP5.11□□□□□ -1.59
HERC1-213ENST00000561359 ASB5Q8WWX0 329 aa5.11□□□□□ -1.59
HERC1-213ENST00000561359 N4BP2L2Q92802 583 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms