RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CXorf49A8MYA2 514 aaPredicted RBP13.48□□□□□ -0.25
TPM1-230ENST00000561266 NVLO15381 856 aaKnown RBP13.48□□□□□ -0.25
TPM1-230ENST00000561266 TTC4O95801 387 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 C1QAP02745 245 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 PVRP15151 417 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 SSTR1P30872 391 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 GPX6P59796 221 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 MC2RQ01718 297 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 PLEKHS1Q5SXH7 462 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 ZNF449Q6P9G9 518 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 CYHR1Q6ZMK1 362 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 OTOAQ7RTW8 1153 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 TRIM73Q86UV7 250 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 AMIGO1Q86WK6 493 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 ZBED8Q8IZ13 594 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 C2orf73Q8N5S3 287 aaPredicted RBP13.48□□□□□ -0.25
TPM1-230ENST00000561266 LINC01555Q8NAE3 123 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 CD200R1Q8TD46 325 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 SEC14L1Q92503 715 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 LRRC39Q96DD0 335 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 GPR21Q99679 349 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 FAM167BQ9BTA0 163 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 NAT9Q9BTE0 207 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 SPRY4Q9C004 299 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 KLHL25Q9H0H3 589 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 TRIT1Q9H3H1 467 aaKnown RBP13.48□□□□□ -0.25
TPM1-230ENST00000561266 SRMSQ9H3Y6 488 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 THSD1Q9NS62 852 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 ZDHHC18Q9NUE0 388 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 SLC39A1Q9NY26 324 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 POMT2Q9UKY4 750 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 UTP11Q9Y3A2 253 aaKnown RBP13.48□□□□□ -0.25
TPM1-230ENST00000561266 PCDHGA7Q9Y5G6 932 aa13.48□□□□□ -0.25
TPM1-230ENST00000561266 B4E171 279 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 RASSF9O75901 435 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 MATN4O95460 622 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 C1orf105O95561 183 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 FOLR1P15328 257 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 ST6GAL1P15907 406 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 PRDX3P30048 256 aaKnown RBP13.47□□□□□ -0.25
TPM1-230ENST00000561266 TSPAN7P41732 249 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 PCBP4P57723 403 aaKnown RBP13.47□□□□□ -0.25
TPM1-230ENST00000561266 PLOD1Q02809 727 aaPredicted RBP13.47□□□□□ -0.25
TPM1-230ENST00000561266 CALCOCO2Q13137 446 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 CLN3Q13286 438 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 KYNUQ16719 465 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 KLHL38Q2WGJ6 581 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 DNTTIP2Q5QJE6 756 aaKnown RBP13.47□□□□□ -0.25
TPM1-230ENST00000561266 C8orf74Q6P047 294 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 OOSP2Q86WS3 158 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 RASGRP3Q8IV61 690 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 SPACA3Q8IXA5 215 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 LMNTD2Q8IXW0 634 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 ZBTB2Q8N680 514 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 BBOF1Q8ND07 529 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 CALML6Q8TD86 181 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 DENND1AQ8TEH3 1009 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 ZDHHC12Q96GR4 267 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 SLC41A2Q96JW4 573 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 OR2A14Q96R47 310 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 TAAR9Q96RI9 348 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 TSSK1BQ9BXA7 367 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 ACTR10Q9NZ32 417 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 DHRS7Q9Y394 339 aa13.47□□□□□ -0.25
TPM1-230ENST00000561266 TEX51A0A1B0GUA7 166 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 GSAPA4D1B5 854 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 SLC9B1P1A6NJY1 282 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 ARHGEF33A8MVX0 844 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 H3BMM5 538 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 EFSO43281 561 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 HCRTR1O43613 425 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 TIAF1O95411 115 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 CHRM5P08912 532 aaPredicted RBP13.46□□□□□ -0.25
TPM1-230ENST00000561266 EBLN1P0CF75 366 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 ZNF28P17035 718 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 NELFEP18615 380 aaKnown RBP13.46□□□□□ -0.25
TPM1-230ENST00000561266 PKLRP30613 574 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 MLLT3P42568 568 aaPredicted RBP13.46□□□□□ -0.25
TPM1-230ENST00000561266 GUCY2DQ02846 1103 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 COL9A2Q14055 689 aaPredicted RBP13.46□□□□□ -0.25
TPM1-230ENST00000561266 FRG1Q14331 258 aaKnown RBP13.46□□□□□ -0.25
TPM1-230ENST00000561266 TMED2Q15363 201 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 ZIC1Q15915 447 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.46□□□□□ -0.25
TPM1-230ENST00000561266 UNC5DQ6UXZ4 953 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 TIPARPQ7Z3E1 657 aaKnown RBP13.46□□□□□ -0.25
TPM1-230ENST00000561266 CPNE9Q8IYJ1 553 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 KIF18AQ8NI77 898 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 DLG3Q92796 817 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 ELMO2Q96JJ3 720 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 OLFM1Q99784 485 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 MCMBPQ9BTE3 642 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 RAB17Q9H0T7 212 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 PPANQ9NQ55 473 aaKnown RBP13.46□□□□□ -0.25
TPM1-230ENST00000561266 FBXO8Q9NRD0 319 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 ACSL6Q9UKU0 697 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 PCDHGA3Q9Y5H0 932 aa13.46□□□□□ -0.25
TPM1-230ENST00000561266 FER1L5A0AVI2 2057 aa13.46□□□□□ -0.26
TPM1-230ENST00000561266 HEATR5BQ9P2D3 2071 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms