RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 KCNE4Q8WWG9 221 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 CD101Q93033 1021 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 OTUB1Q96FW1 271 aaPredicted RBP3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 LINC00615Q96LM1 132 aaPredicted RBP3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 CAMK1GQ96NX5 476 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 MYADMQ96S97 322 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 INPP5KQ9BT40 448 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 URM1Q9BTM9 101 aaKnown RBP3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 SPRY4Q9C004 299 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 IL25Q9H293 177 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 CDH20Q9HBT6 801 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 ZBTB20Q9HC78 741 aaPredicted RBP3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 OSER1Q9NX31 292 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 DDX43Q9NXZ2 648 aaKnown RBP3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 ERAP1Q9NZ08 941 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 PTTG2Q9NZH5 202 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 FLT1P17948 1338 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 IGKV2D-30A0A075B6S6 120 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 A0A1W2PPI3 338 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 NEMP2A6NFY4 417 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 OR6C76A6NM76 312 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 ZNF587BE7ETH6 402 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 GAPDHSO14556 408 aaPredicted RBP3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 IFIT3O14879 490 aaKnown RBP3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 SMAD6O43541 496 aaKnown RBP3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 SLC28A2O43868 658 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 LDB3O75112 727 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 NR3C1P04150 777 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 AMD1P17707 334 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 EPORP19235 508 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 CASTP20810 708 aaKnown RBP3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 MUTP22033 750 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 KRT2P35908 639 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 PRKCIP41743 596 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 LHX1P48742 406 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 NR2C2P49116 596 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 THBS3P49746 956 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 ALDH3A2P51648 485 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 GAS1P54826 345 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 KRT83P78385 493 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 MBTD1Q05BQ5 628 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 KEAP1Q14145 624 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 KIR2DS3Q14952 304 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 ODF4Q2M2E3 257 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 MCMDC2Q4G0Z9 681 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 RAB6CQ53S08 254 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 C6orf136Q5SQH8 315 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 FAM91A1Q658Y4 838 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 TRAT1Q6PIZ9 186 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 PLXDC2Q6UX71 529 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 PIWIL4Q7Z3Z4 852 aaKnown RBP3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 SPATA19Q7Z5L4 167 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 AMIGO1Q86WK6 493 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 NUDT13Q86X67 352 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 ZDHHC17Q8IUH5 632 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 UNC45BQ8IWX7 931 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 CEP57L1Q8IYX8 460 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 NAGSQ8N159 534 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 NUP93Q8N1F7 819 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 DNAJC22Q8N4W6 341 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 NOA1Q8NC60 698 aaKnown RBP3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 SPATA22Q8NHS9 363 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 PSMA8Q8TAA3 256 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 GRK7Q8WTQ7 553 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 PROX1Q92786 737 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 DHX58Q96C10 678 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 SCRN2Q96FV2 425 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 LRRC3BQ96PB8 259 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 FEVQ99581 238 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 CPNE1Q99829 537 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 MTMR12Q9C0I1 747 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 DNAI2Q9GZS0 605 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 RAB6CQ9H0N0 254 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 FAM49AQ9H0Q0 323 aaPredicted RBP3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 CSTL1Q9H114 145 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 RSPH9Q9H1X1 276 aaPredicted RBP3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 GAREM1Q9H706 876 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 ACKR4Q9NPB9 350 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 SERINC1Q9NRX5 453 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 VPS18Q9P253 973 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 CACNG4Q9UBN1 327 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 ITM2BQ9Y287 266 aa3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 ZFP37Q9Y6Q3 630 aaPredicted RBP3.3□□□□□ -1.88
CTDSPL2-211ENST00000561189 A0A087WV48 116 aa3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 ANKRD61A6NGH8 418 aa3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 AP5Z1O43299 807 aa3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 SPRY1O43609 319 aaPredicted RBP3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 BUB3O43684 328 aa3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 CRCPO75575 148 aa3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 IGHV4-39P01824 125 aa3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 C9P02748 559 aa3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 GBAP04062 536 aa3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 PLA2G4BP0C869 781 aa3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 HLA-DOBP13765 273 aa3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 GLULP15104 373 aa3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 TKTP29401 623 aaKnown RBP3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 HOXC8P31273 242 aa3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 FUT6P51993 359 aa3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 CDH11P55287 796 aa3.29□□□□□ -1.88
CTDSPL2-211ENST00000561189 LINC00205P59089 165 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms