RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	CELF6	Q96J87	481 aa	Known RBP	7.07	□□□□□ -1.28
MARK3-223	ENST00000561071	ERGIC2	Q96RQ1	377 aa		7.07	□□□□□ -1.28
MARK3-223	ENST00000561071	CNPY3	Q9BT09	278 aa		7.07	□□□□□ -1.28
MARK3-223	ENST00000561071	TRIM7	Q9C029	511 aa		7.07	□□□□□ -1.28
MARK3-223	ENST00000561071	TTYH3	Q9C0H2	523 aa		7.07	□□□□□ -1.28
MARK3-223	ENST00000561071	VPS11	Q9H270	941 aa		7.07	□□□□□ -1.28
MARK3-223	ENST00000561071	TMEM51	Q9NW97	253 aa		7.07	□□□□□ -1.28
MARK3-223	ENST00000561071	CTTNBP2NL	Q9P2B4	639 aa		7.07	□□□□□ -1.28
MARK3-223	ENST00000561071	LHX3	Q9UBR4	397 aa		7.07	□□□□□ -1.28
MARK3-223	ENST00000561071	PCSK1N	Q9UHG2	260 aa		7.07	□□□□□ -1.28
MARK3-223	ENST00000561071	FZD10	Q9ULW2	581 aa		7.07	□□□□□ -1.28
MARK3-223	ENST00000561071	REXO2	Q9Y3B8	237 aa	Known RBP	7.07	□□□□□ -1.28
MARK3-223	ENST00000561071	CFAP46	Q8IYW2	2715 aa		7.07	□□□□□ -1.28
MARK3-223	ENST00000561071	PTPRQ	Q9UMZ3	2332 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	AREL1	O15033	823 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	CS	O75390	466 aa	Known RBP	7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	UNC5C	O95185	931 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	CSF2	P04141	144 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	CDK4	P11802	303 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	CKMT1A	P12532	417 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	TNFAIP3	P21580	790 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	PEX2	P28328	305 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	SLC7A1	P30825	629 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	RABIF	P47224	123 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	RGR	P47804	291 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	GEMIN4	P57678	1058 aa	Known RBP	7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	PFN3	P60673	137 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	HNRNPK	P61978	463 aa	Known RBP eCLIP	7.06	□□□□□ -1.28	8e-8	■■□□□ 11.4
MARK3-223	ENST00000561071	CXADR	P78310	365 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	E2F1	Q01094	437 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	ZNF844	Q08AG5	666 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	CCDC173	Q0VFZ6	552 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	ILK	Q13418	452 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	MAMLD1	Q13495	774 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	SEMA5A	Q13591	1074 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	ZXDC	Q2QGD7	858 aa	Predicted RBP	7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	KLHL40	Q2TBA0	621 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	GUSBP11	Q6P575	273 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	EFL1	Q7Z2Z2	1120 aa	Known RBP	7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	CAMK1D	Q8IU85	385 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	ANKRD20A12P	Q8NF67	263 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	RFFL	Q8WZ73	363 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	RAB7B	Q96AH8	199 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	NACC2	Q96BF6	587 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	CENPT	Q96BT3	561 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	NAF1	Q96HR8	494 aa	Known RBP	7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	NSMCE3	Q96MG7	304 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	GDAP1L1	Q96MZ0	367 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	LENG8	Q96PV6	779 aa	Predicted RBP	7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	TRIB1	Q96RU8	372 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	PEBP4	Q96S96	227 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	SYT11	Q9BT88	431 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	ALOXE3	Q9BYJ1	711 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	TRIM54	Q9BYV2	358 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	DHX35	Q9H5Z1	703 aa	Known RBP	7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	ETAA1	Q9NY74	926 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	NLGN3	Q9NZ94	848 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	DKK2	Q9UBU2	259 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	KCNE5	Q9UJ90	142 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	MYRF	Q9Y2G1	1151 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	MED16	Q9Y2X0	877 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	MFHAS1	Q9Y4C4	1052 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	KALRN	O60229	2985 aa		7.06	□□□□□ -1.28
MARK3-223	ENST00000561071	HELZ2	Q9BYK8	2649 aa	Known RBP	7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	MGA	Q8IWI9	3026 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	CENPVL1	A0A0U1RR11	272 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	NEMP2	A6NFY4	417 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	LRRC53	A6NM62	1247 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071		A8MX80	341 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	NPIPB8	E9PQR5	432 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	AQP9	O43315	295 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	USP12	O75317	370 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	TM7SF2	O76062	418 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	IGSF6	O95976	241 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	PEX11B	O96011	259 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	CHEK2	O96017	543 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	PRB1	P04280	392 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	ALPPL2	P10696	532 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	SKIL	P12757	684 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	FER	P16591	822 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	TNFRSF1A	P19438	455 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	CHRM3	P20309	590 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	TGM2	P21980	687 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	PSMA2	P25787	234 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	ABCG1	P45844	678 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	PAPOLA	P51003	745 aa	Known RBP	7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	THOP1	P52888	689 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	GSC	P56915	257 aa	Predicted RBP	7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	YBEY	P58557	167 aa	Predicted RBP	7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	TPI1	P60174	286 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	MC2R	Q01718	297 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	IRF4	Q15306	451 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	WSCD2	Q2TBF2	565 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	PARP15	Q460N3	678 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	TIGD2	Q4W5G0	525 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	CCDC183	Q5T5S1	534 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	FAXC	Q5TGI0	409 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	KCTD16	Q68DU8	428 aa		7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	ZNF571	Q7Z3V5	609 aa	Predicted RBP	7.05	□□□□□ -1.28
MARK3-223	ENST00000561071	RD3	Q7Z3Z2	195 aa		7.05	□□□□□ -1.28

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