RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 TRIM56Q9BRZ2 755 aaKnown RBP17.87■□□□□ 0.45
TPM1-226ENST00000560959 LHPPQ9H008 270 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 WDR54Q9H977 334 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 VPS37BQ9H9H4 285 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 FBXL4Q9UKA2 621 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 CAPN11Q9UMQ6 739 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 ARL5AQ9Y689 179 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 MDC1Q14676 2089 aaKnown RBP17.87■□□□□ 0.45
TPM1-226ENST00000560959 CELSR1Q9NYQ6 3014 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 HCRTR1O43613 425 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 JRKO75564 520 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 PIM1P11309 404 aaPredicted RBP17.86■□□□□ 0.45
TPM1-226ENST00000560959 MESDQ14696 234 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 PTPRCAPQ14761 206 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 ZNF324BQ6AW86 544 aaPredicted RBP17.86■□□□□ 0.45
TPM1-226ENST00000560959 OVCH1Q7RTY7 1134 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 NXPE1Q8N323 547 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 DNAJC22Q8N4W6 341 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 PHC3Q8NDX5 983 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 IPMKQ8NFU5 416 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 NAT14Q8WUY8 206 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 DLG3Q92796 817 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 COPS8Q99627 209 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 NDC1Q9BTX1 674 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 SLC26A1Q9H2B4 701 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 MRM3Q9HC36 420 aaKnown RBP17.86■□□□□ 0.45
TPM1-226ENST00000560959 SLC22A11Q9NSA0 550 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 OLAHQ9NV23 265 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 KLHL8Q9P2G9 620 aaPredicted RBP17.86■□□□□ 0.45
TPM1-226ENST00000560959 CRLS1Q9UJA2 301 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 TRHDEQ9UKU6 1024 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 PLCL2Q9UPR0 1127 aa17.86■□□□□ 0.45
TPM1-226ENST00000560959 SOCS6O14544 535 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 SERPINC1P01008 464 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 UGT2B7P16662 529 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 SHMT2P34897 504 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 PBX1P40424 430 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 GCGRP47871 477 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 ARSFP54793 590 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 TFDP2Q14188 446 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 KRTAP21-3Q3LHN1 58 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 ZNF567Q8N184 647 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 LURAP1Q96LR2 239 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 NRTNQ99748 197 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 FSD1LQ9BXM9 530 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 XKR8Q9H6D3 395 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 DDX56Q9NY93 547 aaKnown RBP17.85■□□□□ 0.45
TPM1-226ENST00000560959 OR6C2Q9NZP2 312 aa17.85■□□□□ 0.45
TPM1-226ENST00000560959 LUC7L2Q9Y383 392 aaKnown RBP17.85■□□□□ 0.45
TPM1-226ENST00000560959 ANKRD12Q6UB98 2062 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 PCM1Q15154 2024 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 IGLV3-16A0A075B6K0 115 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 A0A0J9YY10 115 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 PCDH17O14917 1159 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 PDHA2P29803 388 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 DYNLT1P63172 113 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 PRKG2Q13237 762 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 SLC9A5Q14940 896 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 TAZQ16635 292 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 DEFB110Q30KQ9 67 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 GPR33Q49SQ1 333 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 ODF2Q5BJF6 829 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 MTFR2Q6P444 385 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 KIRREL2Q6UWL6 708 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 ISLR2Q6UXK2 745 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 RANBP10Q6VN20 620 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 UNC5AQ6ZN44 842 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 SNX20Q7Z614 316 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 PARP9Q8IXQ6 854 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 FLVCR1-AS1Q8TAF5 88 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 ITLN2Q8WWU7 325 aaPredicted RBP17.84■□□□□ 0.45
TPM1-226ENST00000560959 RNF25Q96BH1 459 aaPredicted RBP17.84■□□□□ 0.45
TPM1-226ENST00000560959 CNDP1Q96KN2 507 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 DEF6Q9H4E7 631 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 ENAMQ9NRM1 1142 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 SAE1Q9UBE0 346 aaPredicted RBP17.84■□□□□ 0.45
TPM1-226ENST00000560959 POLG2Q9UHN1 485 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 FKBPLQ9UIM3 349 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 CDC23Q9UJX2 597 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 ICKQ9UPZ9 632 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 FER1L5A0AVI2 2057 aa17.84■□□□□ 0.45
TPM1-226ENST00000560959 ZGRF1Q86YA3 2104 aa17.83■□□□□ 0.45
TPM1-226ENST00000560959 KRT1P04264 644 aa17.83■□□□□ 0.44
TPM1-226ENST00000560959 CHRM5P08912 532 aaPredicted RBP17.83■□□□□ 0.44
TPM1-226ENST00000560959 TMEM253P0C7T8 217 aa17.83■□□□□ 0.44
TPM1-226ENST00000560959 ITGALP20701 1170 aa17.83■□□□□ 0.44
TPM1-226ENST00000560959 FOXL2P58012 376 aa17.83■□□□□ 0.44
TPM1-226ENST00000560959 MFAP5Q13361 173 aa17.83■□□□□ 0.44
TPM1-226ENST00000560959 INAQ16352 499 aa17.83■□□□□ 0.44
TPM1-226ENST00000560959 SLC18A3Q16572 532 aa17.83■□□□□ 0.44
TPM1-226ENST00000560959 ZNF630Q2M218 657 aaPredicted RBP17.83■□□□□ 0.44
TPM1-226ENST00000560959 BNC2Q6ZN30 1099 aaPredicted RBP17.83■□□□□ 0.44
TPM1-226ENST00000560959 TBC1D21Q8IYX1 336 aa17.83■□□□□ 0.44
TPM1-226ENST00000560959 SLC35G2Q8TBE7 412 aa17.83■□□□□ 0.44
TPM1-226ENST00000560959 SPSB2Q99619 263 aa17.83■□□□□ 0.44
TPM1-226ENST00000560959 HGH1Q9BTY7 390 aa17.83■□□□□ 0.44
TPM1-226ENST00000560959 PACSIN1Q9BY11 444 aa17.83■□□□□ 0.44
TPM1-226ENST00000560959 NXT1Q9UKK6 140 aaKnown RBP17.83■□□□□ 0.44
TPM1-226ENST00000560959 HS3ST3B1Q9Y662 390 aa17.83■□□□□ 0.44
TPM1-226ENST00000560959 CNTRLQ7Z7A1 2325 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms