RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 FIG4Q92562 907 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 CDKL2Q92772 493 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 DGAT2Q96PD7 388 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 SERPINI1Q99574 410 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 TMEM121Q9BTD3 319 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 EFHD1Q9BUP0 239 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 GLRX2Q9NS18 164 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 ENPP5Q9UJA9 477 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 PSME2Q9UL46 239 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 CNTN6Q9UQ52 1028 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 ADAM18Q9Y3Q7 739 aa6.62□□□□□ -1.35
TSPAN3-209ENST00000560715 TEX51A0A1B0GUA7 166 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 PRSS29PA6NIE9 313 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 A8MX80 341 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 ACOT7O00154 380 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 SNPHO15079 494 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 RFPL2O75678 378 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 GJB1P08034 283 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 MMP10P09238 476 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 TXNP10599 105 aaKnown RBP6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 AGAP20933 346 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 SAT1P21673 171 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 NR2F2P24468 414 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 CASP3P42574 277 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 FKBP1AP62942 108 aaKnown RBP6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 CYP4F8P98187 520 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 GABPAQ06546 454 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 PTP4A2Q12974 167 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 FLOT2Q14254 428 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 AOC3Q16853 763 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 FCRL6Q6DN72 434 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 TTC33Q6PID6 262 aaPredicted RBP6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 ANGPTL8Q6UXH0 198 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 SH2D5Q6ZV89 423 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC22A16Q86VW1 577 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC16A10Q8TF71 515 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 CHURC1Q8WUH1 139 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 DCAKDQ8WVC6 231 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC13A3Q8WWT9 602 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 PTERQ96BW5 349 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 DNAJC19Q96DA6 116 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 MRIQ9BWK5 157 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 RAD21L1Q9H4I0 556 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 ATP13A3Q9H7F0 1226 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 BARHL2Q9NY43 387 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 PKD2L1Q9P0L9 805 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 SPASTQ9UBP0 616 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 MARCOQ9UEW3 520 aaPredicted RBP6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 GDF2Q9UK05 429 aaPredicted RBP6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 MED16Q9Y2X0 877 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 PCDHB7Q9Y5E2 793 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 GREB1LQ9C091 1923 aaPredicted RBP6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 LRRIQ4A6NIV6 560 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 TM4SF5O14894 197 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 SNNO75324 88 aaPredicted RBP6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 NADKO95544 446 aaPredicted RBP6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 KRT8P05787 483 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 ANXA6P08133 673 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 EDN2P20800 178 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 RPL10P27635 214 aaKnown RBP6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 LEPRP48357 1165 aaKnown RBP6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC9A3P48764 834 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 HK2P52789 917 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 PER3P56645 1201 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 MAP3K7CLP57077 242 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 GPX6P59796 221 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 RAB32Q13637 225 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 DRAP1Q14919 205 aaPredicted RBP6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 TESK1Q15569 626 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 FSCBQ5H9T9 825 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 KCTD9Q7L273 389 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF786Q8N393 782 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 FBXL6Q8N531 539 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 NAT16Q8N8M0 369 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 OR52E1Q8NGJ3 308 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 RAB2BQ8WUD1 216 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 ASB11Q8WXH4 323 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF560Q96MR9 790 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 WDR11Q9BZH6 1224 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 ZNF518BQ9C0D4 1074 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 SOX17Q9H6I2 414 aaPredicted RBP6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 ACSL6Q9UKU0 697 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 RIMKLBQ9ULI2 386 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 UGT2A1Q9Y4X1 527 aa6.61□□□□□ -1.35
TSPAN3-209ENST00000560715 ADAMTSL1Q8N6G6 1762 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 RNF103-CHMP3A0A140T963 221 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 DENND3A2RUS2 1198 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 DNALI1O14645 258 aaPredicted RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 CA12O43570 354 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 RGS9O75916 674 aaPredicted RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 DNAJB5O75953 348 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 LRIG2O94898 1065 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 PDGFBP01127 241 aaPredicted RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 NTRK1P04629 796 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 FGFR3P22607 806 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 AZGP1P25311 298 aaKnown RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 SLC26A3P40879 764 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 OR3A3P47888 321 aa6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 FAM3BP58499 235 aaPredicted RBP6.6□□□□□ -1.35
TSPAN3-209ENST00000560715 IL11RAQ14626 422 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms