RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CAMK2BQ13554 666 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 ZNF789Q5FWF6 425 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 CNSTQ6PJW8 725 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 MICALCLQ6ZW33 695 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 UNC5BQ8IZJ1 945 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 UHMK1Q8TAS1 419 aaKnown RBP13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 LKAAEAR1Q8TD35 194 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 NCSTNQ92542 709 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 TBC1D10AQ9BXI6 508 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 RHOJQ9H4E5 214 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 OR6C2Q9NZP2 312 aa13.61□□□□□ -0.23
PKNOX1-209ENST00000560448 SPTBN2O15020 2390 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 FAM159BA6NKW6 160 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 MATN4O95460 622 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 MPC1LP0DKB6 136 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 ITGB6P18564 788 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 LSSP48449 732 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 PPM1FP49593 454 aaPredicted RBP13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 ARMC6Q6NXE6 501 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 ZNF549Q6P9A3 640 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 PRSS42Q7Z5A4 293 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 ZC3HC1Q86WB0 502 aaKnown RBP13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 AMIGO1Q86WK6 493 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 ZNF761Q86XN6 746 aaPredicted RBP13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 KMT5CQ86Y97 462 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 FBXO15Q8NCQ5 510 aaPredicted RBP13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 EPS8L3Q8TE67 593 aaKnown RBP13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 LCN9Q8WX39 176 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 RAD51AP1Q96B01 352 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 VPS39Q96JC1 886 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 C9orf72Q96LT7 481 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 NUDT22Q9BRQ3 303 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 SRMSQ9H3Y6 488 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 POLR1BQ9H9Y6 1135 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 RDH14Q9HBH5 336 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 POPDC3Q9HBV1 291 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 TRMT6Q9UJA5 497 aaKnown RBP13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 NOVA2Q9UNW9 492 aaKnown RBP13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 MED16Q9Y2X0 877 aa13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 CFAP20Q9Y6A4 193 aaKnown RBP13.6□□□□□ -0.23
PKNOX1-209ENST00000560448 IGHV5-10-1A0A0J9YXX1 117 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 OR5K3A6NET4 321 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 RASGRF2O14827 1237 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 SHOX2O60902 331 aaPredicted RBP13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 NR1D1P20393 614 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 GABRB3P28472 473 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 CSF2RBP32927 897 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 CSTF2P33240 577 aaKnown RBP eCLIP13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 HSD17B2P37059 387 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 GP5P40197 560 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 GPX6P59796 221 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 SP140Q13342 867 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 USP53Q70EK8 1073 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 STRA8Q7Z7C7 330 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 AGBL5Q8NDL9 886 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 OR52E1Q8NGJ3 308 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 CD200R1Q8TD46 325 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 SKA2Q8WVK7 121 aaPredicted RBP13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 GATA6Q92908 595 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 SLC22A18Q96BI1 424 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 MCMBPQ9BTE3 642 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 CENPHQ9H3R5 247 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 SEMA5BQ9P283 1151 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 ATXN7L1Q9ULK2 861 aaPredicted RBP13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 VWA7Q9Y334 891 aa13.59□□□□□ -0.23
PKNOX1-209ENST00000560448 FAM149AA5PLN7 773 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 TLCD2A6NGC4 264 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 ZNF839A8K0R7 811 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 PLD2O14939 933 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 CAPN5O15484 640 aaPredicted RBP13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 FKBP9O95302 570 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 TOP3BO95985 862 aaKnown RBP13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 CATP04040 527 aaKnown RBP13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 RAB28P51157 221 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 ERVPABLB-1P60509 514 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 POU4F1Q01851 419 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 CFHR1Q03591 330 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 PDAP1Q13442 181 aaKnown RBP13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 PHF19Q5T6S3 580 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 GRTP1Q5TC63 336 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 HECTD2Q5U5R9 776 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 NKAIN2Q5VXU1 208 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 DUS1LQ6P1R4 473 aaKnown RBP13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 ZNF574Q6ZN55 896 aaPredicted RBP13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 RAB11FIP2Q7L804 512 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 ARHGAP22Q7Z5H3 698 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 CCDC91Q7Z6B0 441 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 VRK3Q8IV63 474 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 OR5AR1Q8NGP9 310 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 TSPAN17Q96FV3 270 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 ATXN7L3BQ96GX2 97 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 CCDC74BQ96LY2 380 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 CYTH2Q99418 400 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 GPR21Q99679 349 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 ZNF768Q9H5H4 540 aaKnown RBP13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 SYTL2Q9HCH5 934 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 HRASLS2Q9NWW9 162 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 EURLQ9NYK6 297 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 SPATA7Q9P0W8 599 aa13.58□□□□□ -0.24
PKNOX1-209ENST00000560448 SPEGQ15772 3267 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms