RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 SDR42E2A6NKP2 422 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 PFDN6O15212 129 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 TIAF1O95411 115 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 PRKAR1AP10644 381 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 TCN2P20062 427 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 RPS3P23396 243 aaKnown RBP eCLIP12.2□□□□□ -0.46
LRRC28-214ENST00000559433 AOAHP28039 575 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 CCR10P46092 362 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 GNG11P61952 73 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 RNF187Q5TA31 235 aaPredicted RBP12.2□□□□□ -0.46
LRRC28-214ENST00000559433 UNC5AQ6ZN44 842 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 VRK3Q8IV63 474 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 PPIL6Q8IXY8 311 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 OR8K5Q8NH50 307 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 CFAP61Q8NHU2 1237 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 ZNF669Q96BR6 464 aaPredicted RBP12.2□□□□□ -0.46
LRRC28-214ENST00000559433 SLC45A3Q96JT2 553 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 CAPZA3Q96KX2 299 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 SERPINB12Q96P63 405 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 FCRL4Q96PJ5 515 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 TRIM56Q9BRZ2 755 aaKnown RBP12.2□□□□□ -0.46
LRRC28-214ENST00000559433 PITPNM3Q9BZ71 974 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 DDX47Q9H0S4 455 aaKnown RBP12.2□□□□□ -0.46
LRRC28-214ENST00000559433 ACTR10Q9NZ32 417 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 IL1RAPL1Q9NZN1 696 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 KCND3Q9UK17 655 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 CROTQ9UKG9 612 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 PYCARDQ9ULZ3 195 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 PLAGL1Q9UM63 463 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 CDYLQ9Y232 598 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 BTRCQ9Y297 605 aa12.2□□□□□ -0.46
LRRC28-214ENST00000559433 FAM237BA0A1B0GVD1 139 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 MAGEB16A2A368 324 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 NKX2-8O15522 239 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 GPC4O75487 556 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 SCRG1O75711 98 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 C1QL1O75973 258 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 RPN2P04844 631 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 CHRM5P08912 532 aaPredicted RBP12.19□□□□□ -0.46
LRRC28-214ENST00000559433 FAM87AP0C7U9 286 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 PVRP15151 417 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 ST6GAL1P15907 406 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 OGNP20774 298 aaKnown RBP12.19□□□□□ -0.46
LRRC28-214ENST00000559433 FMO4P31512 558 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 DLSTP36957 453 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 ABRQ12979 859 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 DHX34Q14147 1143 aaKnown RBP12.19□□□□□ -0.46
LRRC28-214ENST00000559433 TYSND1Q2T9J0 566 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 LINC00303Q3SY05 128 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 CTSL3PQ5NE16 218 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 C16orf46Q6P387 395 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 SPESP1Q6UW49 350 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 UNC5DQ6UXZ4 953 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 OTOAQ7RTW8 1153 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 TMEM126BQ8IUX1 230 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 NAT8LQ8N9F0 302 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 SKA2Q8WVK7 121 aaPredicted RBP12.19□□□□□ -0.46
LRRC28-214ENST00000559433 LPGAT1Q92604 370 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 N4BP2L2Q92802 583 aaPredicted RBP12.19□□□□□ -0.46
LRRC28-214ENST00000559433 ZNF501Q96CX3 271 aaPredicted RBP12.19□□□□□ -0.46
LRRC28-214ENST00000559433 TCF12Q99081 682 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 NAPGQ99747 312 aaPredicted RBP12.19□□□□□ -0.46
LRRC28-214ENST00000559433 SLC7A5P2Q9GIP4 190 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 KLHL25Q9H0H3 589 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 KCND1Q9NSA2 647 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 OR6C2Q9NZP2 312 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 ASIC3Q9UHC3 531 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 IL17BQ9UHF5 180 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 MAD1L1Q9Y6D9 718 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 SPTBP11277 2137 aa12.19□□□□□ -0.46
LRRC28-214ENST00000559433 B8ZZF3 427 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 TMEM150CB9EJG8 249 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 KPNA5O15131 536 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 CPNE3O75131 537 aaKnown RBP12.18□□□□□ -0.46
LRRC28-214ENST00000559433 SLCO2B1O94956 709 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 NTRK1P04629 796 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 KLK3P07288 261 aaPredicted RBP12.18□□□□□ -0.46
LRRC28-214ENST00000559433 TPBGLP0DKB5 382 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 UGT2B7P16662 529 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 PKLRP30613 574 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 CDC20Q12834 499 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 NFATC3Q12968 1075 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 THOC5Q13769 683 aaKnown RBP12.18□□□□□ -0.46
LRRC28-214ENST00000559433 PTK6Q13882 451 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 ANKRD20A4Q4UJ75 823 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 RNASEH2BQ5TBB1 312 aaKnown RBP12.18□□□□□ -0.46
LRRC28-214ENST00000559433 ZNF470Q6ECI4 717 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 NEPROQ6NW34 567 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 TRIM73Q86UV7 250 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 CILP2Q8IUL8 1156 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 DCUN1D3Q8IWE4 304 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 EXD3Q8N9H8 876 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 STARD8Q92502 1023 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 FAM136AQ96C01 138 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 BIRC8Q96P09 236 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 TRAPPC9Q96Q05 1148 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 SEMA4CQ9C0C4 833 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 SPHK1Q9NYA1 384 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 CIDEBQ9UHD4 219 aa12.18□□□□□ -0.46
LRRC28-214ENST00000559433 SERTAD3Q9UJW9 196 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms